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GENE CARD

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  1. Gene 'Phfumi.CG.MTP2014.S4...'

Gene Card

Best human hits

NLRP12; NLRP3; NLRP9

Species

P.mammillata

Unique Gene ID

Phmamm.g00007232

Gene Model ID

Phmamm.CG.MTP2014.S322.g07232

Location

S322:31204..43932

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S322.g07232.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

20 results

AHC0AAA15YJ07

Plate: Plate_15_J07

AHC0AAA21YM04

Plate: Plate_21_M04

AHC0AAA3YK15

Plate: Plate_3_K15

AHC0AAA5YF11

Plate: Plate_5_F11

AHC0AAA7YJ14

Plate: Plate_7_J14

AHC0AAA36YO13

Plate: Plate_36_O13

AHC0AAA37YO07

Plate: Plate_37_O07

AHC0AAA39YD11

Plate: Plate_39_D11

AHC0AAA46YD11

Plate: Plate_46_D11

AHC0AAA59YN01

Plate: Plate_59_N01

AHC0AAA62YM15

Plate: Plate_62_M15

AHC0AAA117YG07

Plate: Plate_117_G07

AHC0AAA130YD13

Plate: Plate_130_D13

AHC0AAA149YK21

Plate: Plate_149_K21

AHC0AAA84YN16

Plate: Plate_84_N16

AHC0AAA174YH08

Plate: Plate_174_H08

AHC0AAA181YM04

Plate: Plate_181_M04

AHC0AAA210YF08

Plate: Plate_210_F08

AHC0AAA244YB15

Plate: Plate_244_B15

AHC0AAA39YD09

Plate: Plate_39_D09

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Histone-fold Gene3D Histone-fold
NACHT_NTPase Pfam NACHT nucleoside triphosphatase
Leu-rich_rpt Pfam Leucine-rich repeat
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
CENP-T/H4_C Pfam CENP-T/Histone H4, histone fold
Histone-fold SUPERFAMILY Histone-fold

GOSlim

19 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
transcription factor binding Blast molecular function
identical protein binding Blast molecular function
sequence-specific DNA binding Blast molecular function
protein heterodimerization activity InterProScan molecular function
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
enzyme binding Blast molecular function
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 84.3 3.47e-16
protein binding Hs molecular function 84.3 3.47e-16
ATP binding Hs molecular function 84.3 3.47e-16
extracellular region Hs cellular component 76.3 1.05e-13
nucleus Hs cellular component 76.3 1.05e-13
cytoplasm Hs cellular component 84.3 3.47e-16
endoplasmic reticulum Hs cellular component 76.3 1.05e-13
cytosol Hs cellular component 76.3 1.05e-13
transcription factor binding Hs molecular function 76.3 1.05e-13
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 84.3 3.47e-16
identical protein binding Hs molecular function 76.3 1.05e-13
peptidoglycan binding Hs molecular function 76.3 1.05e-13
sequence-specific DNA binding Hs molecular function 76.3 1.05e-13
inflammasome complex Hs cellular component 77.4 4.13e-14
NLRP3 inflammasome complex Hs cellular component 76.3 1.05e-13

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 0.12
protein heterodimerization activity Gene3D molecular function 3.8E-21