Gene Card
Best human hits
PUF60; U2AF2
Species
Unique Gene ID
Phmamm.g00007317
Gene Model ID
Phmamm.CG.MTP2014.S327.g07317
Location
S327:154412..156446
Transcript Models and Sequences
Phmamm.CG.MTP2014.S327.g07317.01.t
Phmamm.CG.MTP2014.S327.g07317.02.t
AHC0AAA23YN11
Plate: Plate_23_N11
AHC0AAA26YE20
Plate: Plate_26_E20
AHC0AAA26YK05
Plate: Plate_26_K05
AHC0AAA5YJ21
Plate: Plate_5_J21
AHC0AAA5YN02
Plate: Plate_5_N02
AHC0AAA7YL23
Plate: Plate_7_L23
AHC0AAA8YE11
Plate: Plate_8_E11
AHC0AAA9YM10
Plate: Plate_9_M10
AHC0AAA36YB14
Plate: Plate_36_B14
AHC0AAA40YO01
Plate: Plate_40_O01
AHC0AAA45YJ22
Plate: Plate_45_J22
AHC0AAA57YC16
Plate: Plate_57_C16
AHC0AAA58YB17
Plate: Plate_58_B17
AHC0AAA67YO05
Plate: Plate_67_O05
AHC0AAA80YD04
Plate: Plate_80_D04
AHC0AAA102YH01
Plate: Plate_102_H01
AHC0AAA103YM06
Plate: Plate_103_M06
AHC0AAA110YE21
Plate: Plate_110_E21
AHC0AAA111YJ16
Plate: Plate_111_J16
AHC0AAA114YH01
Plate: Plate_114_H01
AHC0AAA116YI24
Plate: Plate_116_I24
AHC0AAA118YA04
Plate: Plate_118_A04
AHC0AAA124YM13
Plate: Plate_124_M13
AHC0AAA126YG04
Plate: Plate_126_G04
AHC0AAA130YB16
Plate: Plate_130_B16
AHC0AAA135YI22
Plate: Plate_135_I22
AHC0AAA140YK09
Plate: Plate_140_K09
AHC0AAA144YA01
Plate: Plate_144_A01
AHC0AAA146YK21
Plate: Plate_146_K21
AHC0AAA152YD08
Plate: Plate_152_D08
AHC0AAA154YH11
Plate: Plate_154_H11
AHC0AAA81YC18
Plate: Plate_81_C18
AHC0AAA83YF14
Plate: Plate_83_F14
AHC0AAA83YP23
Plate: Plate_83_P23
AHC0AAA91YO08
Plate: Plate_91_O08
AHC0AAA95YF17
Plate: Plate_95_F17
AHC0AAA95YK23
Plate: Plate_95_K23
AHC0AAA98YA02
Plate: Plate_98_A02
AHC0AAA159YN17
Plate: Plate_159_N17
AHC0AAA160YB05
Plate: Plate_160_B05
AHC0AAA161YO24
Plate: Plate_161_O24
AHC0AAA164YM09
Plate: Plate_164_M09
AHC0AAA174YD03
Plate: Plate_174_D03
AHC0AAA198YO04
Plate: Plate_198_O04
AHC0AAA206YB18
Plate: Plate_206_B18
AHC0AAA207YC08
Plate: Plate_207_C08
AHC0AAA212YB02
Plate: Plate_212_B02
AHC0AAA225YB19
Plate: Plate_225_B19
AHC0AAA227YN02
Plate: Plate_227_N02
AHC0AAA232YE21
Plate: Plate_232_E21
AHC0AAA234YI16
Plate: Plate_234_I16
AHC0AAA235YK20
Plate: Plate_235_K20
AHC0AAA244YL12
Plate: Plate_244_L12
AHC0AAA253YE22
Plate: Plate_253_E22
AHC0AAA254YM09
Plate: Plate_254_M09
AHC0AAA267YH24
Plate: Plate_267_H24
AHC0AAA268YG24
Plate: Plate_268_G24
AHC0AAA268YO20
Plate: Plate_268_O20
AHC0AAA98YC04
Plate: Plate_98_C04
n/a
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IPR Term | Analysis | Definition |
---|---|---|
Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
RRM_dom | SMART | RNA recognition motif domain |
U2AF_lg | TIGRFAM | U2 snRNP auxilliary factor, large subunit, splicing factor |
RRM_dom | Pfam | RNA recognition motif domain |
RRM_dom | ProSiteProfiles | RNA recognition motif domain |
GO Term | Annotation Origin | Type |
---|---|---|
mRNA splicing, via spliceosome | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
DNA binding | Blast | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
mRNA processing | Orthology | biological process |
RNA splicing | Orthology | biological process |
nuclear speck | Orthology | cellular component |
enzyme binding | Orthology | molecular function |
cell junction | Blast | cellular component |
identical protein binding | Blast | molecular function |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
transcription from RNA polymerase II promoter | Orthology | biological process |
organic substance transport | Orthology | biological process |
intracellular transport | Orthology | biological process |
intracellular protein transport | Orthology | biological process |
gene expression | Orthology | biological process |
protein ubiquitination | Orthology | biological process |
positive regulation of gene expression | Orthology | biological process |
negative regulation of gene expression | Orthology | biological process |
cell adhesion molecule binding | Blast | molecular function |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
commitment complex | Hs | cellular component |
mRNA splicing, via spliceosome | Hs | biological process |
Prp19 complex | Hs | cellular component |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
spliceosomal complex | Hs | cellular component |
termination of RNA polymerase II transcription | Hs | biological process |
mRNA processing | Hs | biological process |
RNA export from nucleus | Hs | biological process |
mRNA export from nucleus | Hs | biological process |
poly-pyrimidine tract binding | Hs | molecular function |
RNA splicing | Hs | biological process |
nuclear speck | Hs | cellular component |
enzyme binding | Hs | molecular function |
pre-mRNA 3'-splice site binding | Hs | molecular function |
mRNA 3'-end processing | Hs | biological process |
negative regulation of protein ubiquitination | Hs | biological process |
positive regulation of RNA splicing | Hs | biological process |
negative regulation of mRNA splicing, via spliceosome | Hs | biological process |
C2H2 zinc finger domain binding | Hs | molecular function |
U2-type prespliceosome | Hs | cellular component |
U2AF | Hs | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
commitment complex | Hs | cellular component | 456 | 9.08e-159 |
Prp19 complex | Hs | cellular component | 456 | 9.08e-159 |
nucleic acid binding | Hs | molecular function | 456 | 9.08e-159 |
DNA binding | Hs | molecular function | 73.2 | 7.71e-14 |
RNA binding | Hs | molecular function | 456 | 9.08e-159 |
protein binding | Hs | molecular function | 456 | 9.08e-159 |
nucleus | Hs | cellular component | 456 | 9.08e-159 |
nucleoplasm | Hs | cellular component | 456 | 9.08e-159 |
spliceosomal complex | Hs | cellular component | 456 | 9.08e-159 |
poly-pyrimidine tract binding | Hs | molecular function | 456 | 9.08e-159 |
nuclear speck | Hs | cellular component | 456 | 9.08e-159 |
enzyme binding | Hs | molecular function | 456 | 9.08e-159 |
cyclin-dependent protein kinase activating kinase holoenzyme complex | Hs | cellular component | 73.2 | 7.71e-14 |
cell junction | Hs | cellular component | 73.2 | 7.71e-14 |
intracellular ribonucleoprotein complex | Hs | cellular component | 73.2 | 7.71e-14 |
pre-mRNA 3'-splice site binding | Hs | molecular function | 456 | 9.08e-159 |
identical protein binding | Hs | molecular function | 73.2 | 7.71e-14 |
cadherin binding | Hs | molecular function | 73.2 | 7.71e-14 |
C2H2 zinc finger domain binding | Hs | molecular function | 456 | 9.08e-159 |
U2-type prespliceosome | Hs | cellular component | 456 | 9.08e-159 |
U2AF | Hs | cellular component | 456 | 9.08e-159 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | SUPERFAMILY | molecular function | 2.77E-32 |
RNA binding | TIGRFAM | molecular function | 1.9E-116 |
nucleus | TIGRFAM | cellular component | 1.9E-116 |
mRNA processing | TIGRFAM | biological process | 1.9E-116 |