Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NLRP12; NOD1; NOD2

Species

P.mammillata

Unique Gene ID

Phmamm.g00017607

Gene Model ID

Phmamm.CG.MTP2014.S3276.g17607

Location

S3276:319..766

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S3276.g17607.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
NACHT_NTPase Pfam NACHT nucleoside triphosphatase

GOSlim

26 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
actin binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
mitochondrion Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
nuclear part Blast cellular component
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 52.4 1.16e-08
actin binding Hs molecular function 47.4 6.19e-07
protein binding Hs molecular function 52.4 1.16e-08
ATP binding Hs molecular function 52.4 1.16e-08
cytoplasm Hs cellular component 52.4 1.16e-08
mitochondrion Hs cellular component 47.4 6.19e-07
Golgi apparatus Hs cellular component 47.4 6.19e-07
cytosol Hs cellular component 52.4 1.16e-08
cytoskeleton Hs cellular component 47.4 6.19e-07
plasma membrane Hs cellular component 52.4 1.16e-08
COP9 signalosome Hs cellular component 47.4 6.19e-07
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 52.4 1.16e-08
cell surface Hs cellular component 47.4 6.19e-07
membrane Hs cellular component 52.4 1.16e-08
basolateral plasma membrane Hs cellular component 52.4 1.16e-08
apical plasma membrane Hs cellular component 52.4 1.16e-08
enzyme binding Hs molecular function 47.4 6.19e-07
protein kinase binding Hs molecular function 47.4 6.19e-07
Hsp70 protein binding Hs molecular function 47.4 6.19e-07
vesicle Hs cellular component 47.4 6.19e-07
muramyl dipeptide binding Hs molecular function 47.4 6.19e-07
macromolecular complex Hs cellular component 47.4 6.19e-07
identical protein binding Hs molecular function 52.4 1.16e-08
protein homodimerization activity Hs molecular function 52.4 1.16e-08
peptidoglycan binding Hs molecular function 52.4 1.16e-08
CARD domain binding Hs molecular function 52.4 1.16e-08
Hsp90 protein binding Hs molecular function 47.4 6.19e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value