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GENE CARD

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Gene Card

Best human hits

RPL3; RPL3L

Species

P.mammillata

Unique Gene ID

Phmamm.g00001309

Gene Model ID

Phmamm.CG.MTP2014.S33.g01309

Location

S33:285636..290304

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

34 results

AHC0AAA14YO11

Plate: Plate_14_O11

AHC0AAA15YF21

Plate: Plate_15_F21

AHC0AAA21YK16

Plate: Plate_21_K16

AHC0AAA29YG21

Plate: Plate_29_G21

AHC0AAA37YM02

Plate: Plate_37_M02

AHC0AAA40YD19

Plate: Plate_40_D19

AHC0AAA46YC22

Plate: Plate_46_C22

AHC0AAA51YE08

Plate: Plate_51_E08

AHC0AAA63YL15

Plate: Plate_63_L15

AHC0AAA70YF05

Plate: Plate_70_F05

AHC0AAA80YG04

Plate: Plate_80_G04

AHC0AAA109YJ06

Plate: Plate_109_J06

AHC0AAA113YN21

Plate: Plate_113_N21

AHC0AAA123YB08

Plate: Plate_123_B08

AHC0AAA139YH08

Plate: Plate_139_H08

AHC0AAA139YJ14

Plate: Plate_139_J14

AHC0AAA140YL18

Plate: Plate_140_L18

AHC0AAA146YJ23

Plate: Plate_146_J23

AHC0AAA154YM20

Plate: Plate_154_M20

AHC0AAA83YL18

Plate: Plate_83_L18

AHC0AAA84YH12

Plate: Plate_84_H12

AHC0AAA88YM21

Plate: Plate_88_M21

AHC0AAA160YC23

Plate: Plate_160_C23

AHC0AAA169YL05

Plate: Plate_169_L05

AHC0AAA173YD22

Plate: Plate_173_D22

AHC0AAA176YF19

Plate: Plate_176_F19

AHC0AAA179YH01

Plate: Plate_179_H01

AHC0AAA181YK08

Plate: Plate_181_K08

AHC0AAA197YF22

Plate: Plate_197_F22

AHC0AAA198YC13

Plate: Plate_198_C13

AHC0AAA198YF21

Plate: Plate_198_F21

AHC0AAA217YI17

Plate: Plate_217_I17

AHC0AAA264YF16

Plate: Plate_264_F16

AHC0AAA268YO01

Plate: Plate_268_O01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Ribosomal_L3 Pfam Ribosomal protein L3
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily

GOSlim

18 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
RNA binding Orthology molecular function
structural constituent of ribosome Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
ribosome Orthology cellular component
focal adhesion Orthology cellular component
translational initiation Orthology biological process
SRP-dependent cotranslational protein targeting to membrane Orthology biological process
membrane Orthology cellular component
macromolecular complex Orthology cellular component
extracellular exosome Orthology cellular component
RNA processing Orthology biological process
intracellular organelle part Orthology cellular component

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
5S rRNA binding Hs molecular function
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
macromolecular complex Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 687 0.0
structural constituent of ribosome Hs molecular function 687 0.0
protein binding Hs molecular function 687 0.0
intracellular Hs cellular component 687 0.0
nucleus Hs cellular component 687 0.0
nucleolus Hs cellular component 687 0.0
cytoplasm Hs cellular component 687 0.0
cytosol Hs cellular component 687 0.0
ribosome Hs cellular component 687 0.0
focal adhesion Hs cellular component 687 0.0
5S rRNA binding Hs molecular function 687 0.0
membrane Hs cellular component 603 0.0
cytosolic large ribosomal subunit Hs cellular component 687 0.0
intracellular ribonucleoprotein complex Hs cellular component 687 0.0
macromolecular complex Hs cellular component 687 0.0
extracellular exosome Hs cellular component 687 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome Pfam molecular function 6.1E-180
intracellular Pfam cellular component 6.1E-180
ribosome Pfam cellular component 6.1E-180
translation Pfam biological process 6.1E-180