Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA192YE09

Plate: Plate_192_E09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Elp2	PANTHER	Elongator complex protein 2
WD40_repeat	ProSiteProfiles	WD40 repeat
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat	Pfam	WD40 repeat
WD40_repeat	SMART	WD40 repeat
Quinoprotein_ADH-like_supfam	SUPERFAMILY	Quinoprotein alcohol dehydrogenase-like superfamily
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily

GOSlim

48 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nuclear envelope	Blast	cellular component
cytoplasm	Orthology	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
microtubule binding	Blast	molecular function
microtubule cytoskeleton	Blast	cellular component
membrane	Blast	cellular component
protein kinase binding	Orthology	molecular function
axon	Blast	cellular component
cell leading edge	Blast	cellular component
nuclear membrane	Blast	cellular component
vesicle	Blast	cellular component
protein homodimerization activity	Blast	molecular function
neuron projection	Blast	cellular component
neuronal cell body	Blast	cellular component
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Blast	cellular component
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Orthology	molecular function
RNA processing	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
intracellular part	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process
cytoplasmic part	Blast	cellular component
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
hydrolase activity	Blast	molecular function
cytoskeletal part	Blast	cellular component
cell periphery	Blast	cellular component
anion binding	Blast	molecular function
carbohydrate derivative binding	Blast	molecular function
cell projection part	Blast	cellular component
organelle	Blast	cellular component
cell projection	Blast	cellular component
plasma membrane region	Blast	cellular component
cluster of actin-based cell projections	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function
macromolecular complex binding	Blast	molecular function

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone acetyltransferase complex	Hs	cellular component
RNA polymerase II core binding	Hs	molecular function
tRNA wobble uridine modification	Hs	biological process
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
transcription elongation factor complex	Hs	cellular component
protein kinase binding	Hs	molecular function
Elongator holoenzyme complex	Hs	cellular component
regulation of JAK-STAT cascade	Hs	biological process

GO (Blast)

46 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone acetyltransferase complex	Hs	cellular component	532	2.54e-178
astral microtubule	Hs	cellular component	63.2	2.37e-10
kinetochore	Hs	cellular component	63.2	2.37e-10
RNA polymerase II core binding	Hs	molecular function	532	2.54e-178
phospholipase A2 activity	Hs	molecular function	63.2	2.37e-10
protein binding	Hs	molecular function	532	2.54e-178
nucleus	Hs	cellular component	532	2.54e-178
nuclear envelope	Hs	cellular component	63.2	2.37e-10
cytoplasm	Hs	cellular component	532	2.54e-178
centrosome	Hs	cellular component	63.2	2.37e-10
microtubule organizing center	Hs	cellular component	63.2	2.37e-10
spindle	Hs	cellular component	63.2	2.37e-10
cytosol	Hs	cellular component	532	2.54e-178
cytoskeleton	Hs	cellular component	63.2	2.37e-10
kinesin complex	Hs	cellular component	63.2	2.37e-10
microtubule	Hs	cellular component	63.2	2.37e-10
microtubule associated complex	Hs	cellular component	63.2	2.37e-10
cell cortex	Hs	cellular component	63.2	2.37e-10
microtubule binding	Hs	molecular function	63.2	2.37e-10
transcription elongation factor complex	Hs	cellular component	532	2.54e-178
heparin binding	Hs	molecular function	63.2	2.37e-10
microtubule cytoskeleton	Hs	cellular component	63.2	2.37e-10
membrane	Hs	cellular component	63.2	2.37e-10
protein kinase binding	Hs	molecular function	532	2.54e-178
axon	Hs	cellular component	63.2	2.37e-10
growth cone	Hs	cellular component	63.2	2.37e-10
cell leading edge	Hs	cellular component	63.2	2.37e-10
motile cilium	Hs	cellular component	63.2	2.37e-10
nuclear membrane	Hs	cellular component	63.2	2.37e-10
vesicle	Hs	cellular component	63.2	2.37e-10
stereocilium	Hs	cellular component	63.2	2.37e-10
Elongator holoenzyme complex	Hs	cellular component	532	2.54e-178
dynactin binding	Hs	molecular function	63.2	2.37e-10
protein homodimerization activity	Hs	molecular function	63.2	2.37e-10
neuron projection	Hs	cellular component	63.2	2.37e-10
neuronal cell body	Hs	cellular component	63.2	2.37e-10
phospholipase binding	Hs	molecular function	63.2	2.37e-10
dynein intermediate chain binding	Hs	molecular function	63.2	2.37e-10
perinuclear region of cytoplasm	Hs	cellular component	63.2	2.37e-10
phosphoprotein binding	Hs	molecular function	63.2	2.37e-10
extracellular exosome	Hs	cellular component	63.2	2.37e-10
dynein complex binding	Hs	molecular function	63.2	2.37e-10
MMXD complex	Hs	cellular component	60.1	1.63e-09
central region of growth cone	Hs	cellular component	63.2	2.37e-10
CIA complex	Hs	cellular component	60.1	1.63e-09
axon cytoplasm	Hs	cellular component	63.2	2.37e-10

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
tRNA wobble uridine modification	PANTHER	biological process	1.5E-250
protein binding	SUPERFAMILY	molecular function	3.2E-26
Elongator holoenzyme complex	PANTHER	cellular component	1.5E-250

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences