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GENE CARD

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Gene Card

Best human hits

RANBP1; RANBP2; RGPD8

Species

P.mammillata

Unique Gene ID

Phmamm.g00001331

Gene Model ID

Phmamm.CG.MTP2014.S34.g01331

Location

S34:151320..155349

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S34.g01331.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

33 results

AHC0AAA11YE21

Plate: Plate_11_E21

AHC0AAA11YO16

Plate: Plate_11_O16

AHC0AAA22YF20

Plate: Plate_22_F20

AHC0AAA3YP06

Plate: Plate_3_P06

AHC0AAA8YA19

Plate: Plate_8_A19

AHC0AAA29YA18

Plate: Plate_29_A18

AHC0AAA34YH23

Plate: Plate_34_H23

AHC0AAA34YJ19

Plate: Plate_34_J19

AHC0AAA47YC11

Plate: Plate_47_C11

AHC0AAA53YI06

Plate: Plate_53_I06

AHC0AAA67YF21

Plate: Plate_67_F21

AHC0AAA68YA13

Plate: Plate_68_A13

AHC0AAA79YP20

Plate: Plate_79_P20

AHC0AAA110YM24

Plate: Plate_110_M24

AHC0AAA114YA04

Plate: Plate_114_A04

AHC0AAA123YP22

Plate: Plate_123_P22

AHC0AAA147YP05

Plate: Plate_147_P05

AHC0AAA148YH09

Plate: Plate_148_H09

AHC0AAA86YH17

Plate: Plate_86_H17

AHC0AAA86YN04

Plate: Plate_86_N04

AHC0AAA88YL17

Plate: Plate_88_L17

AHC0AAA97YG16

Plate: Plate_97_G16

AHC0AAA147YB03

Plate: Plate_147_B03

AHC0AAA172YB22

Plate: Plate_172_B22

AHC0AAA172YO24

Plate: Plate_172_O24

AHC0AAA190YI18

Plate: Plate_190_I18

AHC0AAA204YO16

Plate: Plate_204_O16

AHC0AAA212YP12

Plate: Plate_212_P12

AHC0AAA217YO24

Plate: Plate_217_O24

AHC0AAA220YB16

Plate: Plate_220_B16

AHC0AAA220YE19

Plate: Plate_220_E19

AHC0AAA233YB12

Plate: Plate_233_B12

AHC0AAA251YJ18

Plate: Plate_251_J18

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Ran_bind_dom Pfam Ran binding domain
Ran_bind_dom ProSiteProfiles Ran binding domain
PH-like_dom_sf Gene3D PH-like domain superfamily
Ran_bind_dom SMART Ran binding domain

GOSlim

43 results

GO Term Annotation Origin Type
G1/S transition of mitotic cell cycle Orthology biological process
RNA binding Blast molecular function
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
nuclear envelope Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
cytosol Orthology cellular component
signal transduction Orthology biological process
membrane Blast cellular component
transferase activity Blast molecular function
nuclear membrane Blast cellular component
positive regulation of GTPase activity Orthology biological process
metal ion binding Blast molecular function
intracellular transport Orthology biological process
regulation of catalytic activity Orthology biological process
guanyl ribonucleotide binding Orthology molecular function
anion binding Orthology molecular function
GTPase regulator activity Orthology molecular function
purine ribonucleoside binding Orthology molecular function
organic substance transport Orthology biological process
proteolysis Orthology biological process
intracellular protein transport Orthology biological process
establishment of protein localization to organelle Orthology biological process
microtubule-based process Orthology biological process
organelle organization Orthology biological process
enzyme binding Orthology molecular function
neuron projection development Orthology biological process
cytoplasmic part Orthology cellular component
cell projection part Orthology cellular component
plasma membrane region Orthology cellular component
cell adhesion molecule binding Orthology molecular function
axon Orthology cellular component
catalytic activity Blast molecular function
cellular protein modification process Blast biological process
nuclear outer membrane-endoplasmic reticulum membrane network Blast cellular component
membrane region Blast cellular component
macromolecular complex Blast cellular component
ubiquitin-like protein transferase activity Blast molecular function
protein modification by small protein conjugation Blast biological process
nuclear part Blast cellular component

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
G1/S transition of mitotic cell cycle Hs biological process
GDP-dissociation inhibitor activity Hs molecular function
GTPase activator activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nuclear envelope Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
cytosol Hs cellular component
RNA export from nucleus Hs biological process
ubiquitin-dependent protein catabolic process Hs biological process
protein import into nucleus Hs biological process
spindle organization Hs biological process
signal transduction Hs biological process
Ran GTPase binding Hs molecular function
positive regulation of neuron projection development Hs biological process
viral process Hs biological process
cell projection cytoplasm Hs cellular component
positive regulation of GTPase activity Hs biological process
cadherin binding Hs molecular function
positive regulation of mitotic centrosome separation Hs biological process
intracellular transport Hs biological process
regulation of catalytic activity Hs biological process
response to calcium ion Hs biological process
axon cytoplasm Hs cellular component

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 147 1.46e-40
peptidyl-prolyl cis-trans isomerase activity Hs molecular function 147 1.46e-40
GDP-dissociation inhibitor activity Hs molecular function 210 7.01e-68
GTPase activator activity Hs molecular function 210 7.01e-68
protein binding Hs molecular function 210 7.01e-68
intracellular Hs cellular component 210 7.01e-68
nucleus Hs cellular component 210 7.01e-68
nuclear envelope Hs cellular component 210 7.01e-68
annulate lamellae Hs cellular component 147 1.46e-40
nuclear pore Hs cellular component 147 1.46e-40
cytoplasm Hs cellular component 210 7.01e-68
centrosome Hs cellular component 210 7.01e-68
cytosol Hs cellular component 210 7.01e-68
Ran GTPase binding Hs molecular function 210 7.01e-68
membrane Hs cellular component 147 1.46e-40
transferase activity Hs molecular function 147 1.46e-40
SUMO transferase activity Hs molecular function 147 1.46e-40
nuclear membrane Hs cellular component 147 1.46e-40
cell projection cytoplasm Hs cellular component 210 7.01e-68
nuclear inclusion body Hs cellular component 147 1.46e-40
host cell Hs cellular component 147 1.46e-40
nuclear pore cytoplasmic filaments Hs cellular component 147 1.46e-40
nuclear pore nuclear basket Hs cellular component 147 1.46e-40
cadherin binding Hs molecular function 210 7.01e-68
metal ion binding Hs molecular function 147 1.46e-40
axon cytoplasm Hs cellular component 210 7.01e-68

GO (InterProScan)

1 result

GO Term Analysis Type e-value
intracellular transport SMART biological process 1.1E-48