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GENE CARD

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Gene Card

Best human hits

TM6SF1; TM6SF2

Species

P.mammillata

Unique Gene ID

Phmamm.g00007517

Gene Model ID

Phmamm.CG.MTP2014.S340.g07517

Location

S340:96939..101282

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S340.g07517.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA79YM09

Plate: Plate_79_M09

AHC0AAA158YN09

Plate: Plate_158_N09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
EXPERA ProSiteProfiles EXPERA domain

GOSlim

11 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
organic substance metabolic process Orthology biological process
cytoplasmic part Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
bounding membrane of organelle Orthology cellular component

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
lipid metabolic process Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
regulation of lipid metabolic process Hs biological process
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 111 8.76e-28
lysosome Hs cellular component 111 8.76e-28
lysosomal membrane Hs cellular component 111 8.76e-28
endoplasmic reticulum Hs cellular component 108 7.69e-27
endoplasmic reticulum membrane Hs cellular component 108 7.69e-27
membrane Hs cellular component 111 8.76e-28
integral component of membrane Hs cellular component 111 8.76e-28
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 108 7.69e-27

GO (InterProScan)

No result

GO Term Analysis Type e-value