Gene Card
Best human hits
CCDC88C; HMCN1; SEMA5A
Species
Unique Gene ID
Phmamm.g00007593
Gene Model ID
Phmamm.CG.MTP2014.S345.g07593
Location
S345:82727..93566
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
13 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TSP1_rpt_sf | Gene3D | Thrombospondin type-1 (TSP1) repeat superfamily |
| DEATH-like_dom_sf | SUPERFAMILY | Death-like domain superfamily |
| Allrgn_V5/Tpx1 | PANTHER | Cysteine-rich secretory protein, allergen V5/Tpx-1-related |
| CAP_domain | SMART | CAP domain |
| TSP1_rpt | ProSiteProfiles | Thrombospondin type-1 (TSP1) repeat |
| CARD | ProSiteProfiles | CARD domain |
| TSP1_rpt | Pfam | Thrombospondin type-1 (TSP1) repeat |
| CAP_sf | SUPERFAMILY | CAP superfamily |
| TSP1_rpt_sf | SUPERFAMILY | Thrombospondin type-1 (TSP1) repeat superfamily |
| CAP_domain | Pfam | CAP domain |
| TSP1_rpt | SMART | Thrombospondin type-1 (TSP1) repeat |
| CAP_sf | Gene3D | CAP superfamily |
| Allrgn_V5/Tpx1_CS | ProSitePatterns | Allergen V5/Tpx-1-related, conserved site |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| centrosome | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| microtubule binding | Blast | molecular function |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| regulation of apoptotic process | InterProScan | biological process |
| extracellular region part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| receptor binding | Blast | molecular function |
| plasma membrane region | Blast | cellular component |
| anion binding | Blast | molecular function |
| carbohydrate derivative binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
25 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| calcium ion binding | Hs | molecular function | 58.9 | 2.39e-08 |
| protein binding | Hs | molecular function | 51.2 | 4.67e-06 |
| extracellular region | Hs | cellular component | 58.9 | 2.39e-08 |
| proteinaceous extracellular matrix | Hs | cellular component | 58.9 | 2.39e-08 |
| basement membrane | Hs | cellular component | 58.9 | 2.39e-08 |
| extracellular space | Hs | cellular component | 51.2 | 4.67e-06 |
| cytoplasm | Hs | cellular component | 58.9 | 2.39e-08 |
| centrosome | Hs | cellular component | 47.0 | 9.87e-05 |
| plasma membrane | Hs | cellular component | 51.2 | 4.67e-06 |
| cell cortex | Hs | cellular component | 58.9 | 2.39e-08 |
| microtubule binding | Hs | molecular function | 47.0 | 9.87e-05 |
| membrane | Hs | cellular component | 51.2 | 4.67e-06 |
| integral component of membrane | Hs | cellular component | 51.2 | 4.67e-06 |
| cell junction | Hs | cellular component | 58.9 | 2.39e-08 |
| PDZ domain binding | Hs | molecular function | 47.0 | 9.87e-05 |
| semaphorin receptor binding | Hs | molecular function | 51.2 | 4.67e-06 |
| extracellular matrix | Hs | cellular component | 58.9 | 2.39e-08 |
| cleavage furrow | Hs | cellular component | 58.9 | 2.39e-08 |
| chondroitin sulfate proteoglycan binding | Hs | molecular function | 51.2 | 4.67e-06 |
| neuropilin binding | Hs | molecular function | 51.2 | 4.67e-06 |
| heparan sulfate proteoglycan binding | Hs | molecular function | 51.2 | 4.67e-06 |
| protein self-association | Hs | molecular function | 47.0 | 9.87e-05 |
| syndecan binding | Hs | molecular function | 51.2 | 4.67e-06 |
| dynein light intermediate chain binding | Hs | molecular function | 47.0 | 9.87e-05 |
| extracellular exosome | Hs | cellular component | 58.9 | 2.39e-08 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| extracellular region | ProSitePatterns | cellular component | |
| regulation of apoptotic process | ProSiteProfiles | biological process | 9.5 |
