Gene Card
Best human hits
MTREX; SKIV2L
Species
Unique Gene ID
Phmamm.g00007597
Gene Model ID
Phmamm.CG.MTP2014.S345.g07597
Location
S345:127538..137480
Transcript Models and Sequences
AHC0AAA6YF01
Plate: Plate_6_F01
AHC0AAA54YK24
Plate: Plate_54_K24
AHC0AAA141YO16
Plate: Plate_141_O16
AHC0AAA98YI10
Plate: Plate_98_I10
AHC0AAA164YE20
Plate: Plate_164_E20
AHC0AAA194YA06
Plate: Plate_194_A06
AHC0AAA242YD17
Plate: Plate_242_D17
AHC0AAA253YG17
Plate: Plate_253_G17
AHC0AAA253YO14
Plate: Plate_253_O14
AHC0AAA54YK22
Plate: Plate_54_K22
AHC0AAA98YK12
Plate: Plate_98_K12
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

IPR Term | Analysis | Definition |
---|---|---|
Helicase_C | ProSiteProfiles | Helicase, C-terminal |
Ski2-like | PIRSF | ATP-dependent RNA helicase Ski2-like |
Helicase_C | Pfam | Helicase, C-terminal |
Helicase_C | SMART | Helicase, C-terminal |
Helicase_C | CDD | Helicase, C-terminal |
Ski2_C | Pfam | ATP-dependent RNA helicase Ski2, C-terminal |
P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
Ski2_C | SMART | ATP-dependent RNA helicase Ski2, C-terminal |
rRNA_proc-arch_dom | Pfam | rRNA-processing arch domain |
Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
GO Term | Annotation Origin | Type |
---|---|---|
nucleotide binding | Orthology | molecular function |
mRNA splicing, via spliceosome | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
ATP binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Blast | cellular component |
cytosol | Blast | cellular component |
mRNA processing | Orthology | biological process |
RNA catabolic process | Orthology | biological process |
RNA splicing | Orthology | biological process |
hydrolase activity | Orthology | molecular function |
intracellular part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
RNA processing | Orthology | biological process |
nucleoside-triphosphatase activity | Orthology | molecular function |
nuclear part | Orthology | cellular component |
cytoplasmic part | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
nucleotide binding | Hs | molecular function |
exosome (RNase complex) | Hs | cellular component |
mRNA splicing, via spliceosome | Hs | biological process |
maturation of 5.8S rRNA | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
RNA helicase activity | Hs | molecular function |
ATP-dependent RNA helicase activity | Hs | molecular function |
helicase activity | Hs | molecular function |
protein binding | Hs | molecular function |
ATP binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
spliceosomal complex | Hs | cellular component |
nucleolus | Hs | cellular component |
rRNA processing | Hs | biological process |
mRNA processing | Hs | biological process |
RNA catabolic process | Hs | biological process |
RNA splicing | Hs | biological process |
hydrolase activity | Hs | molecular function |
catalytic step 2 spliceosome | Hs | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleotide binding | Hs | molecular function | 1100 | 0.0 |
exosome (RNase complex) | Hs | cellular component | 1100 | 0.0 |
nucleic acid binding | Hs | molecular function | 1100 | 0.0 |
RNA binding | Hs | molecular function | 1100 | 0.0 |
RNA helicase activity | Hs | molecular function | 1100 | 0.0 |
ATP-dependent RNA helicase activity | Hs | molecular function | 1100 | 0.0 |
helicase activity | Hs | molecular function | 1100 | 0.0 |
protein binding | Hs | molecular function | 1100 | 0.0 |
ATP binding | Hs | molecular function | 1100 | 0.0 |
nucleus | Hs | cellular component | 1100 | 0.0 |
nucleoplasm | Hs | cellular component | 1100 | 0.0 |
spliceosomal complex | Hs | cellular component | 1100 | 0.0 |
nucleolus | Hs | cellular component | 1100 | 0.0 |
cytoplasm | Hs | cellular component | 305 | 3.36e-87 |
cytosol | Hs | cellular component | 305 | 3.36e-87 |
hydrolase activity | Hs | molecular function | 1100 | 0.0 |
Ski complex | Hs | cellular component | 305 | 3.36e-87 |
catalytic step 2 spliceosome | Hs | cellular component | 1100 | 0.0 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | Pfam | molecular function | 1.1E-7 |
RNA binding | PIRSF | molecular function | 8.0E-226 |
RNA helicase activity | PIRSF | molecular function | 8.0E-226 |
ATP binding | Pfam | molecular function | 1.1E-7 |
RNA catabolic process | PIRSF | biological process | 8.0E-226 |