Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CIAO1; POC1A; WRAP73

Species

P.mammillata

Unique Gene ID

Phmamm.g00017760

Gene Model ID

Phmamm.CG.MTP2014.S3456.g17760

Location

S3456:932..2066

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S3456.g17760.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA46YB10

Plate: Plate_46_B10

AHC0AAA109YJ11

Plate: Plate_109_J11

AHC0AAA140YI17

Plate: Plate_140_I17

AHC0AAA149YO16

Plate: Plate_149_O16

AHC0AAA83YA04

Plate: Plate_83_A04

AHC0AAA95YB01

Plate: Plate_95_B01

AHC0AAA161YB20

Plate: Plate_161_B20

AHC0AAA169YG02

Plate: Plate_169_G02

AHC0AAA170YD17

Plate: Plate_170_D17

AHC0AAA195YD11

Plate: Plate_195_D11

AHC0AAA195YK07

Plate: Plate_195_K07

AHC0AAA205YB12

Plate: Plate_205_B12

AHC0AAA209YA01

Plate: Plate_209_A01

AHC0AAA256YF19

Plate: Plate_256_F19

AHC0AAA259YD05

Plate: Plate_259_D05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
WD40_repeat SMART WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat

GOSlim

15 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytoskeleton Orthology cellular component
cell projection organization Orthology biological process
cell projection Blast cellular component
cytoplasmic part Orthology cellular component
cell projection part Orthology cellular component
plasma membrane region Orthology cellular component
macromolecular complex Orthology cellular component
microtubule-based process Orthology biological process
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
cytosol Blast cellular component

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
centrosome Hs cellular component
centriole Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
cell projection organization Hs biological process
ciliary basal body Hs cellular component
mitotic spindle assembly Hs biological process
positive regulation of non-motile cilium assembly Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 50.8 6.93e-07
protein binding Hs molecular function 455 1.83e-159
cytoplasm Hs cellular component 455 1.83e-159
centrosome Hs cellular component 455 1.83e-159
centriole Hs cellular component 455 1.83e-159
microtubule organizing center Hs cellular component 455 1.83e-159
cytoskeleton Hs cellular component 455 1.83e-159
ciliary basal body Hs cellular component 455 1.83e-159
cell projection Hs cellular component 50.8 6.93e-07
MMXD complex Hs cellular component 45.1 4.09e-05
CIA complex Hs cellular component 45.1 4.09e-05

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.5E-35