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GENE CARD

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Gene Card

Best human hits

VPS11

Species

P.mammillata

Unique Gene ID

Phmamm.g00007662

Gene Model ID

Phmamm.CG.MTP2014.S351.g07662

Location

S351:41731..51210

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S351.g07662.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

9 results

AHC0AAA17YM10

Plate: Plate_17_M10

AHC0AAA3YG16

Plate: Plate_3_G16

AHC0AAA42YA08

Plate: Plate_42_A08

AHC0AAA124YH13

Plate: Plate_124_H13

AHC0AAA89YJ15

Plate: Plate_89_J15

AHC0AAA179YM05

Plate: Plate_179_M05

AHC0AAA193YJ16

Plate: Plate_193_J16

AHC0AAA212YN05

Plate: Plate_212_N05

AHC0AAA223YO21

Plate: Plate_223_O21

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Clathrin_H-chain/VPS_repeat ProSiteProfiles Clathrin, heavy chain/VPS, 7-fold repeat
VPS11_C Pfam Vacuolar protein sorting protein 11, C-terminal
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
VPS11 PANTHER Vacuolar protein sorting-associated protein 11

GOSlim

24 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
binding Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
intracellular protein transport Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
metal ion binding Orthology molecular function
vacuole Orthology cellular component
cytoskeletal part Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
intracellular transport Orthology biological process
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
late endosome Hs cellular component
autophagosome Hs cellular component
actin filament Hs cellular component
intracellular protein transport Hs biological process
vesicle docking involved in exocytosis Hs biological process
autophagy Hs biological process
endosome organization Hs biological process
lysosome organization Hs biological process
endosome to lysosome transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
protein domain specific binding Hs molecular function
syntaxin binding Hs molecular function
AP-3 adaptor complex Hs cellular component
clathrin-coated vesicle Hs cellular component
endocytic vesicle Hs cellular component
protein binding, bridging Hs molecular function
HOPS complex Hs cellular component
cytoplasmic vesicle Hs cellular component
regulation of protein stability Hs biological process
late endosome membrane Hs cellular component
CORVET complex Hs cellular component
endosomal vesicle fusion Hs biological process
regulation of SNARE complex assembly Hs biological process
metal ion binding Hs molecular function
toxin transport Hs biological process
positive regulation of cellular protein catabolic process Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 593 0.0
binding Hs molecular function 593 0.0
protein binding Hs molecular function 593 0.0
intracellular Hs cellular component 593 0.0
lysosome Hs cellular component 593 0.0
lysosomal membrane Hs cellular component 593 0.0
endosome Hs cellular component 593 0.0
early endosome Hs cellular component 593 0.0
late endosome Hs cellular component 593 0.0
autophagosome Hs cellular component 593 0.0
actin filament Hs cellular component 593 0.0
membrane Hs cellular component 593 0.0
protein domain specific binding Hs molecular function 593 0.0
syntaxin binding Hs molecular function 593 0.0
AP-3 adaptor complex Hs cellular component 593 0.0
clathrin-coated vesicle Hs cellular component 593 0.0
endocytic vesicle Hs cellular component 593 0.0
protein binding, bridging Hs molecular function 593 0.0
HOPS complex Hs cellular component 593 0.0
cytoplasmic vesicle Hs cellular component 593 0.0
late endosome membrane Hs cellular component 593 0.0
CORVET complex Hs cellular component 593 0.0
metal ion binding Hs molecular function 593 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 7.94E-8
intracellular protein transport ProSiteProfiles biological process 14.003
vesicle-mediated transport ProSiteProfiles biological process 14.003

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