Gene Card
Best human hits
SMG5; SMG6; SMG7
Species
Unique Gene ID
Phmamm.g00007679
Gene Model ID
Phmamm.CG.MTP2014.S353.g07679
Location
S353:10271..21586
Transcript Models and Sequences
Phmamm.CG.MTP2014.S353.g07679.01.t
Phmamm.CG.MTP2014.S353.g07679.02.t
AHC0AAA12YM19
Plate: Plate_12_M19
AHC0AAA18YB13
Plate: Plate_18_B13
AHC0AAA7YA13
Plate: Plate_7_A13
AHC0AAA34YP15
Plate: Plate_34_P15
AHC0AAA35YN14
Plate: Plate_35_N14
AHC0AAA38YH13
Plate: Plate_38_H13
AHC0AAA52YO03
Plate: Plate_52_O03
AHC0AAA54YB10
Plate: Plate_54_B10
AHC0AAA61YI19
Plate: Plate_61_I19
AHC0AAA65YH18
Plate: Plate_65_H18
AHC0AAA74YP15
Plate: Plate_74_P15
AHC0AAA114YD02
Plate: Plate_114_D02
AHC0AAA121YD16
Plate: Plate_121_D16
AHC0AAA139YG03
Plate: Plate_139_G03
AHC0AAA145YD14
Plate: Plate_145_D14
AHC0AAA149YC10
Plate: Plate_149_C10
AHC0AAA151YE18
Plate: Plate_151_E18
AHC0AAA88YC11
Plate: Plate_88_C11
AHC0AAA165YN21
Plate: Plate_165_N21
AHC0AAA168YO15
Plate: Plate_168_O15
AHC0AAA190YA15
Plate: Plate_190_A15
AHC0AAA197YK18
Plate: Plate_197_K18
AHC0AAA202YI16
Plate: Plate_202_I16
AHC0AAA218YP10
Plate: Plate_218_P10
AHC0AAA233YP14
Plate: Plate_233_P14
AHC0AAA242YP10
Plate: Plate_242_P10
AHC0AAA248YK04
Plate: Plate_248_K04
AHC0AAA38YJ15
Plate: Plate_38_J15
AHC0AAA54YD12
Plate: Plate_54_D12
n/a
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IPR Term | Analysis | Definition |
---|---|---|
EST1 | Pfam | Telomerase activating protein Est1 |
DNA/RNA-bd_Est1-type | Pfam | DNA/RNA-binding domain, Est1-type |
TPR-like_helical_dom_sf | SUPERFAMILY | Tetratricopeptide-like helical domain superfamily |
GO Term | Annotation Origin | Type |
---|---|---|
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
DNA binding | Blast | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleolus | Blast | cellular component |
cytoplasm | Orthology | cellular component |
cytosol | Orthology | cellular component |
hydrolase activity | Orthology | molecular function |
ubiquitin protein ligase binding | Orthology | molecular function |
metal ion binding | Blast | molecular function |
RNA metabolic process | Orthology | biological process |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
intracellular protein transport | Orthology | biological process |
gene expression | Orthology | biological process |
organelle organization | Orthology | biological process |
DNA metabolic process | Orthology | biological process |
transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
dephosphorylation | Orthology | biological process |
regulation of cellular metabolic process | Orthology | biological process |
sequence-specific DNA binding | Orthology | molecular function |
enzyme binding | Orthology | molecular function |
macromolecular complex binding | Orthology | molecular function |
RNA catabolic process | Orthology | biological process |
regulation of gene expression | Orthology | biological process |
intracellular organelle part | Blast | cellular component |
intracellular non-membrane-bounded organelle | Blast | cellular component |
cytoskeleton | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
ribonuclease activity | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
telomerase holoenzyme complex | Hs | cellular component |
cytoplasm | Hs | cellular component |
cytosol | Hs | cellular component |
mRNA export from nucleus | Hs | biological process |
ubiquitin protein ligase binding | Hs | molecular function |
regulation of telomere maintenance via telomerase | Hs | biological process |
regulation of dephosphorylation | Hs | biological process |
telomeric DNA binding | Hs | molecular function |
histone deacetylase binding | Hs | molecular function |
ribonucleoprotein complex binding | Hs | molecular function |
regulation of RNA stability | Hs | biological process |
protein phosphatase 2A binding | Hs | molecular function |
telomerase RNA binding | Hs | molecular function |
DNA polymerase binding | Hs | molecular function |
RNA phosphodiester bond hydrolysis | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
telomerase catalytic core complex | Hs | cellular component | 54.7 | 2.65e-07 |
chromosome, telomeric region | Hs | cellular component | 54.7 | 2.65e-07 |
DNA binding | Hs | molecular function | 54.7 | 2.65e-07 |
RNA binding | Hs | molecular function | 54.7 | 2.65e-07 |
nuclease activity | Hs | molecular function | 54.7 | 2.65e-07 |
endonuclease activity | Hs | molecular function | 54.7 | 2.65e-07 |
endoribonuclease activity | Hs | molecular function | 54.7 | 2.65e-07 |
ribonuclease activity | Hs | molecular function | 259 | 2.73e-73 |
protein binding | Hs | molecular function | 259 | 2.73e-73 |
nucleus | Hs | cellular component | 259 | 2.73e-73 |
chromosome | Hs | cellular component | 54.7 | 2.65e-07 |
telomerase holoenzyme complex | Hs | cellular component | 259 | 2.73e-73 |
nucleolus | Hs | cellular component | 54.7 | 2.65e-07 |
cytoplasm | Hs | cellular component | 259 | 2.73e-73 |
cytosol | Hs | cellular component | 259 | 2.73e-73 |
hydrolase activity | Hs | molecular function | 54.7 | 2.65e-07 |
ubiquitin protein ligase binding | Hs | molecular function | 259 | 2.73e-73 |
exon-exon junction complex | Hs | cellular component | 54.7 | 2.65e-07 |
telomeric DNA binding | Hs | molecular function | 259 | 2.73e-73 |
histone deacetylase binding | Hs | molecular function | 259 | 2.73e-73 |
ribonucleoprotein complex binding | Hs | molecular function | 259 | 2.73e-73 |
intermediate filament cytoskeleton | Hs | cellular component | 65.1 | 1.51e-10 |
metal ion binding | Hs | molecular function | 54.7 | 2.65e-07 |
protein phosphatase 2A binding | Hs | molecular function | 259 | 2.73e-73 |
telomerase RNA binding | Hs | molecular function | 259 | 2.73e-73 |
DNA polymerase binding | Hs | molecular function | 259 | 2.73e-73 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
protein binding | SUPERFAMILY | molecular function | 7.96E-46 |