Gene Card
Best human hits
COL21A1; COL24A1; MARCO
Species
Unique Gene ID
Phmamm.g00017819
Gene Model ID
Phmamm.CG.MTP2014.S3536.g17819
Location
S3536:783..2532
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Fibrinogen-like_C | SUPERFAMILY | Fibrinogen-like, C-terminal |
| Collagen | Pfam | Collagen triple helix repeat |
| Fibrinogen_a/b/g_C_dom | Pfam | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain |
| Fibrinogen_a/b/g_C_dom | ProSiteProfiles | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain |
| Fibrinogen_a/b/g_C_1 | Gene3D | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 |
GOSlim
25 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| transmembrane signaling receptor activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| intracellular | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| endoplasmic reticulum lumen | Blast | cellular component |
| cytosol | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| innate immune response | Blast | biological process |
| binding | Blast | molecular function |
| receptor binding | Blast | molecular function |
| membrane organization | Blast | biological process |
| organelle organization | Blast | biological process |
| extracellular region part | Blast | cellular component |
| structural molecule activity | Blast | molecular function |
| macromolecular complex | Blast | cellular component |
| signal transduction | Blast | biological process |
| signaling receptor activity | Blast | molecular function |
| intracellular organelle part | Blast | cellular component |
| whole membrane | Blast | cellular component |
| cytoplasmic vesicle | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| amyloid-beta binding | Hs | molecular function | 111 | 1.58e-26 |
| G-protein coupled receptor binding | Hs | molecular function | 111 | 1.58e-26 |
| transmembrane signaling receptor activity | Hs | molecular function | 111 | 1.58e-26 |
| scavenger receptor activity | Hs | molecular function | 111 | 1.58e-26 |
| extracellular matrix structural constituent | Hs | molecular function | 115 | 1.48e-27 |
| protein binding | Hs | molecular function | 115 | 1.48e-27 |
| extracellular region | Hs | cellular component | 115 | 1.37e-27 |
| proteinaceous extracellular matrix | Hs | cellular component | 115 | 1.37e-27 |
| collagen trimer | Hs | cellular component | 115 | 1.37e-27 |
| intracellular | Hs | cellular component | 111 | 1.58e-26 |
| cytoplasm | Hs | cellular component | 115 | 1.37e-27 |
| endoplasmic reticulum lumen | Hs | cellular component | 115 | 1.37e-27 |
| cytosol | Hs | cellular component | 115 | 1.37e-27 |
| plasma membrane | Hs | cellular component | 111 | 1.58e-26 |
| integral component of plasma membrane | Hs | cellular component | 111 | 1.58e-26 |
| signaling pattern recognition receptor activity | Hs | molecular function | 111 | 1.58e-26 |
| membrane | Hs | cellular component | 111 | 1.58e-26 |
| integral component of membrane | Hs | cellular component | 111 | 1.58e-26 |
| endocytic vesicle membrane | Hs | cellular component | 111 | 1.58e-26 |
| extracellular matrix | Hs | cellular component | 115 | 1.37e-27 |
| GO Term | Analysis | Type | e-value |
|---|
