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Gene Card

Best human hits

PACS1; PACS2

Species

P.mammillata

Unique Gene ID

Phmamm.g00007803

Gene Model ID

Phmamm.CG.MTP2014.S362.g07803

Location

S362:40807..52924

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S362.g07803.01.t
Phmamm.CG.MTP2014.S362.g07803.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

16 results

AHC0AAA19YA16

Plate: Plate_19_A16

AHC0AAA36YC20

Plate: Plate_36_C20

AHC0AAA51YM17

Plate: Plate_51_M17

AHC0AAA52YO15

Plate: Plate_52_O15

AHC0AAA61YA22

Plate: Plate_61_A22

AHC0AAA68YL05

Plate: Plate_68_L05

AHC0AAA106YN14

Plate: Plate_106_N14

AHC0AAA142YE22

Plate: Plate_142_E22

AHC0AAA156YO18

Plate: Plate_156_O18

AHC0AAA96YK12

Plate: Plate_96_K12

AHC0AAA106YP16

Plate: Plate_106_P16

AHC0AAA180YN04

Plate: Plate_180_N04

AHC0AAA186YC11

Plate: Plate_186_C11

AHC0AAA186YG11

Plate: Plate_186_G11

AHC0AAA229YH02

Plate: Plate_229_H02

AHC0AAA236YH10

Plate: Plate_236_H10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Phosphofurin_acidic_CS-1 PANTHER Phosphofurin acidic cluster sorting protein 1
Phosphofurin_acidic_CS-1 Pfam Phosphofurin acidic cluster sorting protein 1

GOSlim

12 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
mitochondrion Orthology cellular component
endoplasmic reticulum Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
apoptotic process Orthology biological process
ubiquitin-like protein transferase activity Orthology molecular function
ligase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
cytoplasmic vesicle Orthology cellular component
cellular protein localization Orthology biological process
protein localization to membrane Orthology biological process

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
autophagosome assembly Hs biological process
protein binding Hs molecular function
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
apoptotic process Hs biological process
viral process Hs biological process
COPI-coated vesicle Hs cellular component
protein localization to pre-autophagosomal structure Hs biological process
ion channel binding Hs molecular function
protein localization to plasma membrane Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 480 3.26e-155
mitochondrion Hs cellular component 479 1.11e-155
endoplasmic reticulum Hs cellular component 479 1.11e-155
Golgi apparatus Hs cellular component 480 3.26e-155
cytosol Hs cellular component 480 3.26e-155
COPI-coated vesicle Hs cellular component 480 3.26e-155
ion channel binding Hs molecular function 480 3.26e-155

GO (InterProScan)

No result

GO Term Analysis Type e-value

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