Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

PABPC3; TIA1; TIAL1

Species

P.mammillata

Unique Gene ID

Phmamm.g00007866

Gene Model ID

Phmamm.CG.MTP2014.S366.g07866

Location

S366:41655..50980

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

32 results

AHC0AAA39YC01

Plate: Plate_39_C01

AHC0AAA49YI13

Plate: Plate_49_I13

AHC0AAA53YP06

Plate: Plate_53_P06

AHC0AAA61YN15

Plate: Plate_61_N15

AHC0AAA63YG16

Plate: Plate_63_G16

AHC0AAA68YA03

Plate: Plate_68_A03

AHC0AAA73YO15

Plate: Plate_73_O15

AHC0AAA74YM05

Plate: Plate_74_M05

AHC0AAA101YL12

Plate: Plate_101_L12

AHC0AAA119YB18

Plate: Plate_119_B18

AHC0AAA127YN22

Plate: Plate_127_N22

AHC0AAA128YM18

Plate: Plate_128_M18

AHC0AAA129YF15

Plate: Plate_129_F15

AHC0AAA132YL01

Plate: Plate_132_L01

AHC0AAA132YL10

Plate: Plate_132_L10

AHC0AAA136YJ07

Plate: Plate_136_J07

AHC0AAA137YJ13

Plate: Plate_137_J13

AHC0AAA156YJ04

Plate: Plate_156_J04

AHC0AAA87YK23

Plate: Plate_87_K23

AHC0AAA158YH07

Plate: Plate_158_H07

AHC0AAA159YF03

Plate: Plate_159_F03

AHC0AAA179YP01

Plate: Plate_179_P01

AHC0AAA188YK12

Plate: Plate_188_K12

AHC0AAA196YD12

Plate: Plate_196_D12

AHC0AAA203YH15

Plate: Plate_203_H15

AHC0AAA206YO19

Plate: Plate_206_O19

AHC0AAA214YD15

Plate: Plate_214_D15

AHC0AAA218YG07

Plate: Plate_218_G07

AHC0AAA236YE09

Plate: Plate_236_E09

AHC0AAA241YK13

Plate: Plate_241_K13

AHC0AAA258YE20

Plate: Plate_258_E20

AHC0AAA39YE03

Plate: Plate_39_E03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RRM_dom ProSiteProfiles RNA recognition motif domain
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom SMART RNA recognition motif domain
RRM_dom Pfam RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily

GOSlim

26 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
lysosome Orthology cellular component
cytosol Orthology cellular component
regulation of transcription from RNA polymerase II promoter Orthology biological process
apoptotic process Orthology biological process
defense response Orthology biological process
positive regulation of cell proliferation Orthology biological process
extracellular exosome Orthology cellular component
gamete generation Orthology biological process
cell development Orthology biological process
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
cell division Orthology biological process
negative regulation of gene expression Orthology biological process
mRNA splicing, via spliceosome Orthology biological process
regulation of gene expression Orthology biological process
nuclear part Orthology cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
lysosome Hs cellular component
cytosol Hs cellular component
regulation of transcription from RNA polymerase II promoter Hs biological process
apoptotic process Hs biological process
defense response Hs biological process
germ cell development Hs biological process
poly(A) binding Hs molecular function
positive regulation of cell proliferation Hs biological process
fibroblast growth factor receptor signaling pathway Hs biological process
cytoplasmic stress granule Hs cellular component
AU-rich element binding Hs molecular function
stem cell division Hs biological process
negative regulation of translation Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
regulation of mRNA splicing, via spliceosome Hs biological process
extracellular exosome Hs cellular component
nuclear stress granule Hs cellular component

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 281 3.32e-91
DNA binding Hs molecular function 264 3.37e-84
RNA binding Hs molecular function 281 3.32e-91
protein binding Hs molecular function 281 3.32e-91
nucleus Hs cellular component 281 3.32e-91
nucleoplasm Hs cellular component 281 3.32e-91
cytoplasm Hs cellular component 281 3.32e-91
lysosome Hs cellular component 264 3.37e-84
cytosol Hs cellular component 281 3.32e-91
poly(A) binding Hs molecular function 281 3.32e-91
cytoplasmic stress granule Hs cellular component 281 3.32e-91
AU-rich element binding Hs molecular function 281 3.32e-91
intracellular ribonucleoprotein complex Hs cellular component 281 3.32e-91
extracellular exosome Hs cellular component 264 3.37e-84
nuclear stress granule Hs cellular component 281 3.32e-91

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.91E-36