Aniseed - Gene card

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Genoscope Yasuo Villefranche

60 results

AHC0AAA92YE03

Plate: Plate_92_E03

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
TF_GTP-bd_dom	Pfam	Transcription factor, GTP-binding domain
G_TR_CS	ProSitePatterns	Tr-type G domain, conserved site
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
EFTu-like_2	Pfam	Translation elongation factor EFTu-like, domain 2
Transl_elong_EFTu/EF1A_C	Pfam	Translation elongation factor EFTu/EF1A, C-terminal
TF_GTP-bd_dom	ProSiteProfiles	Transcription factor, GTP-binding domain
Transl_elong_EF1A/Init_IF2_C	SUPERFAMILY	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
Transl_B-barrel_sf	SUPERFAMILY	Translation protein, beta-barrel domain superfamily
TF_GTP-bd_dom	PRINTS	Transcription factor, GTP-binding domain

GOSlim

38 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
protein binding	Orthology	molecular function
calmodulin binding	Orthology	molecular function
GTP binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Blast	cellular component
protein kinase binding	Orthology	molecular function
neuronal cell body	Orthology	cellular component
positive regulation of apoptotic process	Orthology	biological process
myelin sheath	Orthology	cellular component
extracellular exosome	Orthology	cellular component
regulation of gene expression	Orthology	biological process
cytoplasmic part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cellular protein modification process	Orthology	biological process
cell periphery	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
cell projection membrane	Orthology	cellular component
cell leading edge	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
endomembrane system	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
cellular response to organic substance	Orthology	biological process
membrane part	Orthology	cellular component
lysosomal membrane	Orthology	cellular component

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
tRNA binding	Hs	molecular function
nucleotide binding	Hs	molecular function
RNA binding	Hs	molecular function
translation elongation factor activity	Hs	molecular function
GTPase activity	Hs	molecular function
protein binding	Hs	molecular function
calmodulin binding	Hs	molecular function
GTP binding	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
eukaryotic translation elongation factor 1 complex	Hs	cellular component
plasma membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
translation	Hs	biological process
translational elongation	Hs	biological process
protein methylation	Hs	biological process
translation factor activity, RNA binding	Hs	molecular function
response to inorganic substance	Hs	biological process
membrane	Hs	cellular component
protein kinase binding	Hs	molecular function
cortical actin cytoskeleton	Hs	cellular component
ruffle membrane	Hs	cellular component
secretory granule lumen	Hs	cellular component
neuronal cell body	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
myelin sheath	Hs	cellular component
response to electrical stimulus	Hs	biological process
extracellular exosome	Hs	cellular component
cellular response to epidermal growth factor stimulus	Hs	biological process
cytoplasmic side of lysosomal membrane	Hs	cellular component
ficolin-1-rich granule lumen	Hs	cellular component

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	712	0.0
nucleotide binding	Hs	molecular function	712	0.0
RNA binding	Hs	molecular function	712	0.0
translation elongation factor activity	Hs	molecular function	712	0.0
GTPase activity	Hs	molecular function	712	0.0
protein binding	Hs	molecular function	712	0.0
calmodulin binding	Hs	molecular function	712	0.0
GTP binding	Hs	molecular function	712	0.0
extracellular region	Hs	cellular component	712	0.0
extracellular space	Hs	cellular component	712	0.0
intracellular	Hs	cellular component	295	1.42e-93
nucleus	Hs	cellular component	712	0.0
nucleolus	Hs	cellular component	712	0.0
cytoplasm	Hs	cellular component	712	0.0
cytosol	Hs	cellular component	712	0.0
eukaryotic translation elongation factor 1 complex	Hs	cellular component	712	0.0
plasma membrane	Hs	cellular component	712	0.0
translation factor activity, RNA binding	Hs	molecular function	709	0.0
membrane	Hs	cellular component	712	0.0
integral component of membrane	Hs	cellular component	295	1.42e-93
protein kinase binding	Hs	molecular function	712	0.0
cortical actin cytoskeleton	Hs	cellular component	712	0.0
ruffle membrane	Hs	cellular component	712	0.0
secretory granule lumen	Hs	cellular component	712	0.0
neuronal cell body	Hs	cellular component	709	0.0
myelin sheath	Hs	cellular component	712	0.0
extracellular exosome	Hs	cellular component	712	0.0
cytoplasmic side of lysosomal membrane	Hs	cellular component	712	0.0
ficolin-1-rich granule lumen	Hs	cellular component	712	0.0

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	5.5E-55
GTP binding	Pfam	molecular function	5.5E-55

Gene Card

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Transcript Models and Sequences