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GENE CARD

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Gene Card

Best human hits

CELSR3; NOTCH3; SLIT2

Species

P.mammillata

Unique Gene ID

Phmamm.g00007977

Gene Model ID

Phmamm.CG.MTP2014.S375.g07977

Location

S375:86137..90732

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S375.g07977.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

18 results

AHC0AAA17YL02

Plate: Plate_17_L02

AHC0AAA22YD12

Plate: Plate_22_D12

AHC0AAA25YI22

Plate: Plate_25_I22

AHC0AAA29YE10

Plate: Plate_29_E10

AHC0AAA52YL13

Plate: Plate_52_L13

AHC0AAA66YH18

Plate: Plate_66_H18

AHC0AAA74YN21

Plate: Plate_74_N21

AHC0AAA101YD24

Plate: Plate_101_D24

AHC0AAA136YJ23

Plate: Plate_136_J23

AHC0AAA140YB02

Plate: Plate_140_B02

AHC0AAA151YC23

Plate: Plate_151_C23

AHC0AAA154YG19

Plate: Plate_154_G19

AHC0AAA180YO10

Plate: Plate_180_O10

AHC0AAA181YE14

Plate: Plate_181_E14

AHC0AAA183YL08

Plate: Plate_183_L08

AHC0AAA208YM24

Plate: Plate_208_M24

AHC0AAA222YC06

Plate: Plate_222_C06

AHC0AAA242YF03

Plate: Plate_242_F03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
EGF-like_CS ProSitePatterns EGF-like, conserved site
ZP_dom Pfam Zona pellucida domain
ZP_dom ProSiteProfiles Zona pellucida domain
ZP_dom SMART Zona pellucida domain

GOSlim

28 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
enzyme binding Blast molecular function
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
extracellular exosome Blast cellular component
regulation of GTPase activity Blast biological process
GTPase regulator activity Blast molecular function
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
cytoskeleton Blast cellular component
macromolecular complex Blast cellular component
cell adhesion molecule binding Blast molecular function
receptor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 43.9 1.87e-04
signal transducer activity Hs molecular function 45.1 9.96e-05
receptor activity Hs molecular function 43.9 1.87e-04
transmembrane signaling receptor activity Hs molecular function 45.1 9.96e-05
G-protein coupled receptor activity Hs molecular function 45.1 9.96e-05
GTPase inhibitor activity Hs molecular function 42.0 7.64e-04
calcium ion binding Hs molecular function 45.1 9.96e-05
protein binding Hs molecular function 45.1 9.96e-05
extracellular region Hs cellular component 43.9 1.87e-04
extracellular space Hs cellular component 42.0 7.64e-04
nucleus Hs cellular component 43.9 1.87e-04
nucleoplasm Hs cellular component 43.9 1.87e-04
cytoplasm Hs cellular component 42.0 7.64e-04
endoplasmic reticulum membrane Hs cellular component 43.9 1.87e-04
cytosol Hs cellular component 43.9 1.87e-04
plasma membrane Hs cellular component 45.1 9.96e-05
heparin binding Hs molecular function 42.0 7.64e-04
actin cytoskeleton Hs cellular component 43.9 1.87e-04
membrane Hs cellular component 45.1 9.96e-05
integral component of membrane Hs cellular component 45.1 9.96e-05
enzyme binding Hs molecular function 43.9 1.87e-04
identical protein binding Hs molecular function 43.9 1.87e-04
protein homodimerization activity Hs molecular function 42.0 7.64e-04
receptor complex Hs cellular component 43.9 1.87e-04
laminin-1 binding Hs molecular function 42.0 7.64e-04
proteoglycan binding Hs molecular function 42.0 7.64e-04
cadherin binding Hs molecular function 43.9 1.87e-04
Roundabout binding Hs molecular function 42.0 7.64e-04
extracellular exosome Hs cellular component 42.0 7.64e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value