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GENE CARD

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Gene Card

Best human hits

TAF11

Species

P.mammillata

Unique Gene ID

Phmamm.g00008033

Gene Model ID

Phmamm.CG.MTP2014.S380.g08033

Location

S380:10402..17883

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S380.g08033.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA10YA04

Plate: Plate_10_A04

AHC0AAA21YN24

Plate: Plate_21_N24

AHC0AAA33YI21

Plate: Plate_33_I21

AHC0AAA40YL16

Plate: Plate_40_L16

AHC0AAA108YG21

Plate: Plate_108_G21

AHC0AAA126YK17

Plate: Plate_126_K17

AHC0AAA128YI20

Plate: Plate_128_I20

AHC0AAA145YL21

Plate: Plate_145_L21

AHC0AAA90YJ20

Plate: Plate_90_J20

AHC0AAA95YM11

Plate: Plate_95_M11

AHC0AAA166YL02

Plate: Plate_166_L02

AHC0AAA168YF23

Plate: Plate_168_F23

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
TAFII28 CDD TAFII28-like protein
Histone-fold SUPERFAMILY Histone-fold
Histone-fold Gene3D Histone-fold
TAFII28 Pfam TAFII28-like protein

GOSlim

15 results

GO Term Annotation Origin Type
transcription coactivator activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
Golgi apparatus Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
transcription initiation from RNA polymerase II promoter Orthology biological process
protein heterodimerization activity Orthology molecular function
protein N-terminus binding Orthology molecular function
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
receptor binding Orthology molecular function
transcription factor binding Orthology molecular function

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
transcription coactivator activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor TFIID complex Hs cellular component
Golgi apparatus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
snRNA transcription from RNA polymerase II promoter Hs biological process
vitamin D receptor binding Hs molecular function
thyroid hormone receptor binding Hs molecular function
protein heterodimerization activity Hs molecular function
protein N-terminus binding Hs molecular function
RNA polymerase II transcriptional preinitiation complex assembly Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription coactivator activity Hs molecular function 93.6 5.62e-25
protein binding Hs molecular function 93.6 5.62e-25
nucleus Hs cellular component 93.6 5.62e-25
nucleoplasm Hs cellular component 93.6 5.62e-25
transcription factor TFIID complex Hs cellular component 93.6 5.62e-25
Golgi apparatus Hs cellular component 93.6 5.62e-25
vitamin D receptor binding Hs molecular function 93.6 5.62e-25
thyroid hormone receptor binding Hs molecular function 93.6 5.62e-25
protein heterodimerization activity Hs molecular function 93.6 5.62e-25
protein N-terminus binding Hs molecular function 93.6 5.62e-25

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleus CDD cellular component 1.99786E-23
transcription initiation from RNA polymerase II promoter CDD biological process 1.99786E-23
protein heterodimerization activity Gene3D molecular function 9.6E-17