Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

MPDZ; PATJ; SLC9A3R2

Species

P.mammillata

Unique Gene ID

Phmamm.g00008049

Gene Model ID

Phmamm.CG.MTP2014.S381.g08049

Location

S381:60439..71060

Transcript Models and Sequences

Phmamm.CG.MTP2014.S381.g08049.01.t
Phmamm.CG.MTP2014.S381.g08049.02.t
Phmamm.CG.MTP2014.S381.g08049.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA127YN02

Plate: Plate_127_N02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Ubiquitin-like_domsf	SUPERFAMILY	Ubiquitin-like domain superfamily
PDZ	ProSiteProfiles	PDZ domain
PDZ	SMART	PDZ domain
RA_dom	Pfam	Ras-associating (RA) domain
PDZ_sf	SUPERFAMILY	PDZ superfamily

GOSlim

30 results

GO Term	Annotation Origin	Type
receptor binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
protein C-terminus binding	Blast	molecular function
endomembrane system	Blast	cellular component
membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
cell junction	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
cell projection	Blast	cellular component
neuron projection	Blast	cellular component
apical part of cell	Blast	cellular component
synapse	Blast	cellular component
postsynaptic membrane	Blast	cellular component
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Blast	cellular component
signal transduction	InterProScan	biological process
organelle	Blast	cellular component
postsynapse	Blast	cellular component
neuron part	Blast	cellular component
plasma membrane region	Blast	cellular component
enzyme binding	Blast	molecular function
myelin sheath	Blast	cellular component
cell adhesion molecule binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
receptor binding	Hs	molecular function	42.4	0.001
protein binding	Hs	molecular function	42.4	0.001
nucleus	Hs	cellular component	42.4	0.001
cytoplasm	Hs	cellular component	42.4	0.002
centrosome	Hs	cellular component	42.0	0.002
microtubule organizing center	Hs	cellular component	42.0	0.002
cytosol	Hs	cellular component	42.0	0.002
plasma membrane	Hs	cellular component	42.4	0.001
bicellular tight junction	Hs	cellular component	42.4	0.002
focal adhesion	Hs	cellular component	42.4	0.001
beta-catenin binding	Hs	molecular function	42.4	0.001
protein C-terminus binding	Hs	molecular function	42.4	0.001
endomembrane system	Hs	cellular component	42.4	0.001
postsynaptic density	Hs	cellular component	42.4	0.002
membrane	Hs	cellular component	42.4	0.001
apical plasma membrane	Hs	cellular component	42.4	0.001
apicolateral plasma membrane	Hs	cellular component	42.4	0.002
phosphatase binding	Hs	molecular function	42.4	0.001
cell junction	Hs	cellular component	42.4	0.002
dendrite	Hs	cellular component	42.4	0.002
cytoplasmic vesicle	Hs	cellular component	42.4	0.002
protein complex scaffold activity	Hs	molecular function	42.4	0.001
cell projection	Hs	cellular component	42.4	0.002
neuron projection	Hs	cellular component	42.4	0.002
Schmidt-Lanterman incisure	Hs	cellular component	42.4	0.002
apical part of cell	Hs	cellular component	42.0	0.002
synapse	Hs	cellular component	42.4	0.002
postsynaptic membrane	Hs	cellular component	42.4	0.002
cadherin binding	Hs	molecular function	42.4	0.001
perinuclear region of cytoplasm	Hs	cellular component	42.0	0.002
extracellular exosome	Hs	cellular component	42.4	0.001

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	2.0E-9
signal transduction	Pfam	biological process	8.7E-5