- Gene 'Boschl.CG.Botznik201...' >
- >
- Gene 'Phmamm.CG.MTP2014.S4...'
Gene Card
Best human hits
C6; C7; C8A
Species
Unique Gene ID
Phmamm.g00000176
Gene Model ID
Phmamm.CG.MTP2014.S4.g00176
Location
S4:134406..137247
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
16 results
| IPR Term | Analysis | Definition |
|---|---|---|
| MACPF | ProSiteProfiles | Membrane attack complex component/perforin (MACPF) domain |
| TSP1_rpt_sf | SUPERFAMILY | Thrombospondin type-1 (TSP1) repeat superfamily |
| LDrepeatLR_classA_rpt | ProSiteProfiles | Low-density lipoprotein (LDL) receptor class A repeat |
| LDrepeatLR_classA_rpt | SMART | Low-density lipoprotein (LDL) receptor class A repeat |
| TSP1_rpt | ProSiteProfiles | Thrombospondin type-1 (TSP1) repeat |
| MACPF | Pfam | Membrane attack complex component/perforin (MACPF) domain |
| EGF-like_dom | ProSiteProfiles | EGF-like domain |
| LDrepeatLR_classA_rpt | Pfam | Low-density lipoprotein (LDL) receptor class A repeat |
| LDLR_class-A_CS | ProSitePatterns | Low-density lipoprotein (LDL) receptor class A, conserved site |
| EGF-like_CS | ProSitePatterns | EGF-like, conserved site |
| LDL_receptor-like_sf | SUPERFAMILY | LDL receptor-like superfamily |
| LDrepeatLR_classA_rpt | CDD | Low-density lipoprotein (LDL) receptor class A repeat |
| TSP1_rpt | Pfam | Thrombospondin type-1 (TSP1) repeat |
| MACPF | SMART | Membrane attack complex component/perforin (MACPF) domain |
| TSP1_rpt | SMART | Thrombospondin type-1 (TSP1) repeat |
| TSP1_rpt_sf | Gene3D | Thrombospondin type-1 (TSP1) repeat superfamily |
GOSlim
9 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
10 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| complement binding | Hs | molecular function | 96.7 | 1.64e-21 |
| protein binding | Hs | molecular function | 146 | 3.41e-38 |
| extracellular region | Hs | cellular component | 146 | 3.41e-38 |
| membrane attack complex | Hs | cellular component | 146 | 3.41e-38 |
| extracellular space | Hs | cellular component | 96.7 | 1.64e-21 |
| plasma membrane | Hs | cellular component | 96.7 | 1.64e-21 |
| membrane | Hs | cellular component | 96.7 | 1.64e-21 |
| integral component of membrane | Hs | cellular component | 96.7 | 1.64e-21 |
| extracellular exosome | Hs | cellular component | 146 | 3.41e-38 |
| blood microparticle | Hs | cellular component | 96.7 | 1.64e-21 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Pfam | molecular function | 2.3E-7 |
