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GENE CARD

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  1. Gene 'Phfumi.CG.MTP2014.S5...' > 
  2. Gene 'Phmamm.CG.MTP2014.S1...' > 
  3. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

CARF; KDM5A

Species

P.mammillata

Unique Gene ID

Phmamm.g00000186

Gene Model ID

Phmamm.CG.MTP2014.S4.g00186

Location

S4:209528..212883

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4.g00186.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type
CaRF Pfam Calcium-responsive transcription factor
Znf_PHD SMART Zinc finger, PHD-type

GOSlim

18 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
zinc ion binding Blast molecular function
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
transcription regulatory region sequence-specific DNA binding Blast molecular function
catalytic activity Blast molecular function
nuclear part Blast cellular component
macromolecular complex Blast cellular component
organelle organization Blast biological process
cellular protein modification process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 69.3 5.24e-12
core promoter sequence-specific DNA binding Hs molecular function 41.2 0.002
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 69.3 5.24e-12
DNA binding Hs molecular function 69.3 5.24e-12
chromatin binding Hs molecular function 41.2 0.002
transcription factor activity, sequence-specific DNA binding Hs molecular function 69.3 5.24e-12
transcription coactivator activity Hs molecular function 41.2 0.002
protein binding Hs molecular function 41.2 0.002
nucleus Hs cellular component 69.3 5.24e-12
nucleoplasm Hs cellular component 69.3 5.24e-12
nucleolus Hs cellular component 69.3 5.24e-12
zinc ion binding Hs molecular function 41.2 0.002
oxidoreductase activity Hs molecular function 41.2 0.002
cyclin-dependent protein kinase activating kinase holoenzyme complex Hs cellular component 41.2 0.002
chromatin DNA binding Hs molecular function 41.2 0.002
histone demethylase activity Hs molecular function 41.2 0.002
protein-DNA complex Hs cellular component 41.2 0.002
histone demethylase activity (H3-trimethyl-K4 specific) Hs molecular function 41.2 0.002
histone demethylase activity (H3-dimethyl-K4 specific) Hs molecular function 41.2 0.002
methylated histone binding Hs molecular function 41.2 0.002
histone binding Hs molecular function 41.2 0.002
metal ion binding Hs molecular function 41.2 0.002
dioxygenase activity Hs molecular function 41.2 0.002

GO (InterProScan)

No result

GO Term Analysis Type e-value

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