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GENE CARD

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Gene Card

Best human hits

COL24A1; FCN3; MARCO

Species

P.mammillata

Unique Gene ID

Phmamm.g00018196

Gene Model ID

Phmamm.CG.MTP2014.S4069.g18196

Location

S4069:5783..7372

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4069.g18196.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Collagen Pfam Collagen triple helix repeat
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1

GOSlim

26 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
intracellular Blast cellular component
endoplasmic reticulum lumen Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
innate immune response Blast biological process
metal ion binding Blast molecular function
binding Blast molecular function
receptor binding Blast molecular function
membrane organization Blast biological process
organelle organization Blast biological process
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
macromolecular complex Blast cellular component
signal transduction Blast biological process
signaling receptor activity Blast molecular function
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
bounding membrane of organelle Blast cellular component
extracellular space Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
amyloid-beta binding Hs molecular function 63.5 1.38e-11
G-protein coupled receptor binding Hs molecular function 63.5 1.38e-11
antigen binding Hs molecular function 59.7 1.98e-10
serine-type endopeptidase activity Hs molecular function 59.7 1.98e-10
transmembrane signaling receptor activity Hs molecular function 63.5 1.38e-11
scavenger receptor activity Hs molecular function 63.5 1.38e-11
extracellular matrix structural constituent Hs molecular function 65.1 4.69e-12
protein binding Hs molecular function 65.1 4.69e-12
extracellular region Hs cellular component 65.1 4.69e-12
proteinaceous extracellular matrix Hs cellular component 65.1 4.69e-12
collagen trimer Hs cellular component 65.1 4.69e-12
intracellular Hs cellular component 63.5 1.38e-11
endoplasmic reticulum lumen Hs cellular component 65.1 4.69e-12
plasma membrane Hs cellular component 63.5 1.38e-11
integral component of plasma membrane Hs cellular component 63.5 1.38e-11
signaling pattern recognition receptor activity Hs molecular function 63.5 1.38e-11
membrane Hs cellular component 63.5 1.38e-11
integral component of membrane Hs cellular component 63.5 1.38e-11
carbohydrate binding Hs molecular function 59.7 1.98e-10
endocytic vesicle membrane Hs cellular component 63.5 1.38e-11
metal ion binding Hs molecular function 59.7 1.98e-10
blood microparticle Hs cellular component 59.7 1.98e-10

GO (InterProScan)

No result

GO Term Analysis Type e-value