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GENE CARD

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Gene Card

Best human hits

P3H1; P3H2; P3H3

Species

P.mammillata

Unique Gene ID

Phmamm.g00008433

Gene Model ID

Phmamm.CG.MTP2014.S412.g08433

Location

S412:113343..121603

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

21 results

AHC0AAA12YA12

Plate: Plate_12_A12

AHC0AAA31YE01

Plate: Plate_31_E01

AHC0AAA43YP22

Plate: Plate_43_P22

AHC0AAA44YI06

Plate: Plate_44_I06

AHC0AAA51YE05

Plate: Plate_51_E05

AHC0AAA66YO22

Plate: Plate_66_O22

AHC0AAA77YD02

Plate: Plate_77_D02

AHC0AAA101YB01

Plate: Plate_101_B01

AHC0AAA106YB24

Plate: Plate_106_B24

AHC0AAA117YB15

Plate: Plate_117_B15

AHC0AAA129YD05

Plate: Plate_129_D05

AHC0AAA139YA06

Plate: Plate_139_A06

AHC0AAA149YC15

Plate: Plate_149_C15

AHC0AAA92YD06

Plate: Plate_92_D06

AHC0AAA164YA13

Plate: Plate_164_A13

AHC0AAA171YF14

Plate: Plate_171_F14

AHC0AAA186YF05

Plate: Plate_186_F05

AHC0AAA214YO23

Plate: Plate_214_O23

AHC0AAA223YD17

Plate: Plate_223_D17

AHC0AAA233YO13

Plate: Plate_233_O13

AHC0AAA92YF08

Plate: Plate_92_F08

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Oxoglu/Fe-dep_dioxygenase Pfam Oxoglutarate/iron-dependent dioxygenase
Pro_4_hyd_alph SMART Prolyl 4-hydroxylase, alpha subunit
Oxoglu/Fe-dep_dioxygenase ProSiteProfiles Oxoglutarate/iron-dependent dioxygenase
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily

GOSlim

25 results

GO Term Annotation Origin Type
iron ion binding Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum lumen Orthology cellular component
Golgi apparatus Orthology cellular component
protein folding Orthology biological process
negative regulation of cell proliferation Orthology biological process
membrane Orthology cellular component
macromolecular complex Orthology cellular component
macromolecular complex binding Orthology molecular function
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
extracellular exosome Orthology cellular component
extracellular region part Orthology cellular component
neuron projection development Orthology biological process
catalytic activity Orthology molecular function
cellular protein modification process Orthology biological process
small molecule binding Orthology molecular function
anion binding Orthology molecular function
coenzyme binding Orthology molecular function
metabolic process Orthology biological process
biosynthetic process Orthology biological process
protein transport Orthology biological process
animal organ development Orthology biological process

GO (Orthology)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
iron ion binding Hs molecular function
protein binding Hs molecular function
collagen binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
basement membrane Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum lumen Hs cellular component
Golgi apparatus Hs cellular component
protein folding Hs biological process
negative regulation of cell proliferation Hs biological process
positive regulation of neuron projection development Hs biological process
membrane Hs cellular component
oxidoreductase activity Hs molecular function
sarcoplasmic reticulum Hs cellular component
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function
protein hydroxylation Hs biological process
peptidyl-proline hydroxylation Hs biological process
procollagen-proline 3-dioxygenase activity Hs molecular function
L-ascorbic acid binding Hs molecular function
collagen metabolic process Hs biological process
collagen biosynthetic process Hs biological process
macromolecular complex Hs cellular component
macromolecular complex binding Hs molecular function
metal ion binding Hs molecular function
regulation of protein secretion Hs biological process
protein stabilization Hs biological process
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process
bone development Hs biological process
chaperone-mediated protein folding Hs biological process
extracellular exosome Hs cellular component
catalytic complex Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
iron ion binding Hs molecular function 421 3.18e-136
protein binding Hs molecular function 421 3.18e-136
collagen binding Hs molecular function 421 3.18e-136
extracellular region Hs cellular component 421 3.18e-136
proteinaceous extracellular matrix Hs cellular component 421 3.18e-136
basement membrane Hs cellular component 273 3.53e-81
endoplasmic reticulum Hs cellular component 421 3.18e-136
endoplasmic reticulum lumen Hs cellular component 421 3.18e-136
Golgi apparatus Hs cellular component 273 3.53e-81
membrane Hs cellular component 421 3.18e-136
oxidoreductase activity Hs molecular function 421 3.18e-136
sarcoplasmic reticulum Hs cellular component 273 3.53e-81
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function 421 3.18e-136
procollagen-proline 3-dioxygenase activity Hs molecular function 421 3.18e-136
L-ascorbic acid binding Hs molecular function 421 3.18e-136
macromolecular complex Hs cellular component 421 3.18e-136
macromolecular complex binding Hs molecular function 421 3.18e-136
metal ion binding Hs molecular function 421 3.18e-136
dioxygenase activity Hs molecular function 421 3.18e-136
extracellular exosome Hs cellular component 421 3.18e-136
catalytic complex Hs cellular component 311 7.87e-95

GO (InterProScan)

8 results

GO Term Analysis Type e-value
iron ion binding SMART molecular function 5.1E-38
protein binding SUPERFAMILY molecular function 3.04E-6
oxidoreductase activity Pfam molecular function 1.1E-9
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SMART molecular function 5.1E-38
procollagen-proline 3-dioxygenase activity PANTHER molecular function 7.1E-162
L-ascorbic acid binding SMART molecular function 5.1E-38
collagen metabolic process PANTHER biological process 7.1E-162
oxidation-reduction process SMART biological process 5.1E-38