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GENE CARD

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Gene Card

Best human hits

ADGRB2; ADGRB3; HMCN1

Species

P.mammillata

Unique Gene ID

Phmamm.g00018237

Gene Model ID

Phmamm.CG.MTP2014.S4125.g18237

Location

S4125:12..5606

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4125.g18237.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA72YA06

Plate: Plate_72_A06

AHC0AAA201YD13

Plate: Plate_201_D13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
EGF-like_dom ProSiteProfiles EGF-like domain
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
EGF-like_Ca-bd_dom Pfam EGF-like calcium-binding domain
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
EGF-like_CS ProSitePatterns EGF-like, conserved site
FBN PANTHER Fibrillin
EGF-like_dom SMART EGF-like domain

GOSlim

21 results

GO Term Annotation Origin Type
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
GTPase activator activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
extracellular exosome Blast cellular component
postsynapse Blast cellular component
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component
synapse part Blast cellular component
structural molecule activity InterProScan molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
signal transducer activity Hs molecular function 124 3.56e-30
transmembrane signaling receptor activity Hs molecular function 124 3.56e-30
G-protein coupled receptor activity Hs molecular function 124 3.56e-30
GTPase activator activity Hs molecular function 124 3.56e-30
calcium ion binding Hs molecular function 142 2.92e-36
protein binding Hs molecular function 124 3.56e-30
extracellular region Hs cellular component 142 2.92e-36
proteinaceous extracellular matrix Hs cellular component 142 2.92e-36
basement membrane Hs cellular component 142 2.92e-36
cytoplasm Hs cellular component 142 2.92e-36
centrosome Hs cellular component 111 5.09e-26
plasma membrane Hs cellular component 124 3.56e-30
cell cortex Hs cellular component 142 2.92e-36
membrane Hs cellular component 124 3.56e-30
integral component of membrane Hs cellular component 124 3.56e-30
cell junction Hs cellular component 142 2.92e-36
extracellular matrix Hs cellular component 142 2.92e-36
cleavage furrow Hs cellular component 142 2.92e-36
synaptic cleft Hs cellular component 124 3.56e-30
extracellular exosome Hs cellular component 142 2.92e-36
postsynapse Hs cellular component 124 3.56e-30

GO (InterProScan)

3 results

GO Term Analysis Type e-value
calcium ion binding PANTHER molecular function 3.8E-61
proteinaceous extracellular matrix PANTHER cellular component 3.8E-61
extracellular matrix structural constituent PANTHER molecular function 3.8E-61