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GENE CARD

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Gene Card

Best human hits

EEF2; EFL1; EFTUD2

Species

P.mammillata

Unique Gene ID

Phmamm.g00008562

Gene Model ID

Phmamm.CG.MTP2014.S422.g08562

Location

S422:118630..129092

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S422.g08562.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA51YG24

Plate: Plate_51_G24

AHC0AAA57YA05

Plate: Plate_57_A05

AHC0AAA61YC14

Plate: Plate_61_C14

AHC0AAA73YD23

Plate: Plate_73_D23

AHC0AAA116YA18

Plate: Plate_116_A18

AHC0AAA127YM15

Plate: Plate_127_M15

AHC0AAA132YD06

Plate: Plate_132_D06

AHC0AAA132YM13

Plate: Plate_132_M13

AHC0AAA158YM03

Plate: Plate_158_M03

AHC0AAA173YD03

Plate: Plate_173_D03

AHC0AAA197YC24

Plate: Plate_197_C24

AHC0AAA207YB24

Plate: Plate_207_B24

AHC0AAA218YF08

Plate: Plate_218_F08

AHC0AAA220YF06

Plate: Plate_220_F06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

19 results

IPR Term Analysis Definition
EFG_III/V SUPERFAMILY EF-G domain III/V-like
Ribosomal_S5_D2-typ_fold_subgr Gene3D Ribosomal protein S5 domain 2-type fold, subgroup
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
EFG_V-like SMART Elongation factor EFG, domain V-like
Transl_elong_EFG/EF2_IV Pfam Translation elongation factor EFG/EF2, domain IV
G_TR_CS ProSitePatterns Tr-type G domain, conserved site
EFG_V-like Pfam Elongation factor EFG, domain V-like
NUDIX_hydrolase_dom ProSiteProfiles NUDIX hydrolase domain
NUDIX_hydrolase-like_dom_sf SUPERFAMILY NUDIX hydrolase-like domain superfamily
NUDIX_hydrolase_dom Pfam NUDIX hydrolase domain
Tetra_PHTase CDD Bis(5'-nucleosyl)-tetraphosphatase
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
TF_GTP-bd_dom ProSiteProfiles Transcription factor, GTP-binding domain
Transl_elong_EFG/EF2_IV SMART Translation elongation factor EFG/EF2, domain IV
Ribosomal_S5_D2-typ_fold SUPERFAMILY Ribosomal protein S5 domain 2-type fold
EFTu-like_2 Pfam Translation elongation factor EFTu-like, domain 2
TF_GTP-bd_dom PRINTS Transcription factor, GTP-binding domain
TF_GTP-bd_dom Pfam Transcription factor, GTP-binding domain

GOSlim

44 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
nuclear speck Blast cellular component
protein kinase binding Orthology molecular function
membrane raft Orthology cellular component
actin filament binding Orthology molecular function
extracellular exosome Orthology cellular component
hydrolase activity InterProScan molecular function
animal organ development Orthology biological process
immune system process Orthology biological process
cell differentiation Orthology biological process
response to stress Orthology biological process
regulation of gene expression Orthology biological process
macromolecular complex Orthology cellular component
cellular protein modification process Orthology biological process
developmental process Orthology biological process
neurogenesis Orthology biological process
cell proliferation Orthology biological process
intracellular part Orthology cellular component
response to lipid Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
cellular response to stress Orthology biological process
response to oxidative stress Orthology biological process
ribosome Orthology cellular component
macromolecular complex binding Orthology molecular function
cell adhesion molecule binding Orthology molecular function
response to organic substance Orthology biological process
positive regulation of gene expression Orthology biological process
nuclear part Blast cellular component
nuclear body Blast cellular component
pyrophosphatase activity InterProScan molecular function

GO (Orthology)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
p53 binding Hs molecular function
hematopoietic progenitor cell differentiation Hs biological process
response to ischemia Hs biological process
skeletal muscle contraction Hs biological process
RNA binding Hs molecular function
translation elongation factor activity Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
polysome Hs cellular component
plasma membrane Hs cellular component
translation Hs biological process
translational elongation Hs biological process
protein methylation Hs biological process
aging Hs biological process
5S rRNA binding Hs molecular function
glial cell proliferation Hs biological process
membrane Hs cellular component
aggresome Hs cellular component
peptidyl-diphthamide biosynthetic process from peptidyl-histidine Hs biological process
protein kinase binding Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
response to estradiol Hs biological process
secretory granule lumen Hs cellular component
response to endoplasmic reticulum stress Hs biological process
skeletal muscle cell differentiation Hs biological process
response to drug Hs biological process
response to hydrogen peroxide Hs biological process
polysomal ribosome Hs cellular component
ribosome binding Hs molecular function
membrane raft Hs cellular component
cadherin binding Hs molecular function
response to ethanol Hs biological process
positive regulation of translation Hs biological process
actin filament binding Hs molecular function
extracellular exosome Hs cellular component
ficolin-1-rich granule lumen Hs cellular component
positive regulation of cytoplasmic translation Hs biological process

GO (Blast)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 1340 0.0
p53 binding Hs molecular function 1340 0.0
RNA binding Hs molecular function 1340 0.0
translation elongation factor activity Hs molecular function 1340 0.0
GTPase activity Hs molecular function 1340 0.0
protein binding Hs molecular function 1340 0.0
GTP binding Hs molecular function 1340 0.0
extracellular region Hs cellular component 1340 0.0
nucleus Hs cellular component 1340 0.0
nucleoplasm Hs cellular component 632 0.0
spliceosomal complex Hs cellular component 632 0.0
cytoplasm Hs cellular component 1340 0.0
cytosol Hs cellular component 1340 0.0
polysome Hs cellular component 1340 0.0
plasma membrane Hs cellular component 1340 0.0
5S rRNA binding Hs molecular function 1340 0.0
Cajal body Hs cellular component 632 0.0
membrane Hs cellular component 1340 0.0
aggresome Hs cellular component 1340 0.0
nuclear speck Hs cellular component 632 0.0
protein kinase binding Hs molecular function 1340 0.0
intracellular ribonucleoprotein complex Hs cellular component 1340 0.0
secretory granule lumen Hs cellular component 1340 0.0
polysomal ribosome Hs cellular component 1340 0.0
ribosome binding Hs molecular function 1340 0.0
membrane raft Hs cellular component 1340 0.0
cadherin binding Hs molecular function 1340 0.0
U4/U6 x U5 tri-snRNP complex Hs cellular component 632 0.0
actin filament binding Hs molecular function 1340 0.0
extracellular exosome Hs cellular component 1340 0.0
U2-type catalytic step 2 spliceosome Hs cellular component 632 0.0
catalytic step 2 spliceosome Hs cellular component 632 0.0
ficolin-1-rich granule lumen Hs cellular component 1340 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 9.9E-67
GTP binding Pfam molecular function 9.9E-67
bis(5'-nucleosyl)-tetraphosphatase activity CDD molecular function 2.47947E-39
hydrolase activity SUPERFAMILY molecular function 3.11E-16