Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ADGRB2; ADGRB3; HMCN1

Species

P.mammillata

Unique Gene ID

Phmamm.g00008706

Gene Model ID

Phmamm.CG.MTP2014.S436.g08706

Location

S436:96240..101894

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S436.g08706.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

20 results

AHC0AAA17YN24

Plate: Plate_17_N24

AHC0AAA19YG14

Plate: Plate_19_G14

AHC0AAA44YI20

Plate: Plate_44_I20

AHC0AAA49YL12

Plate: Plate_49_L12

AHC0AAA50YC02

Plate: Plate_50_C02

AHC0AAA102YI02

Plate: Plate_102_I02

AHC0AAA122YC20

Plate: Plate_122_C20

AHC0AAA122YE20

Plate: Plate_122_E20

AHC0AAA127YM03

Plate: Plate_127_M03

AHC0AAA149YE18

Plate: Plate_149_E18

AHC0AAA83YF01

Plate: Plate_83_F01

AHC0AAA167YC13

Plate: Plate_167_C13

AHC0AAA169YC23

Plate: Plate_169_C23

AHC0AAA191YP20

Plate: Plate_191_P20

AHC0AAA196YI15

Plate: Plate_196_I15

AHC0AAA197YC08

Plate: Plate_197_C08

AHC0AAA202YE11

Plate: Plate_202_E11

AHC0AAA207YP19

Plate: Plate_207_P19

AHC0AAA267YF15

Plate: Plate_267_F15

AHC0AAA268YL03

Plate: Plate_268_L03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily

GOSlim

20 results

GO Term Annotation Origin Type
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
GTPase activator activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
extracellular exosome Blast cellular component
postsynapse Blast cellular component
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component
synapse part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
signal transducer activity Hs molecular function 96.3 2.33e-20
transmembrane signaling receptor activity Hs molecular function 96.3 2.33e-20
G-protein coupled receptor activity Hs molecular function 96.3 2.33e-20
GTPase activator activity Hs molecular function 96.3 2.33e-20
calcium ion binding Hs molecular function 94.4 1.24e-19
protein binding Hs molecular function 96.3 2.33e-20
extracellular region Hs cellular component 94.4 1.24e-19
proteinaceous extracellular matrix Hs cellular component 94.4 1.24e-19
basement membrane Hs cellular component 94.4 1.24e-19
cytoplasm Hs cellular component 94.4 1.24e-19
centrosome Hs cellular component 94.7 7.35e-20
plasma membrane Hs cellular component 96.3 2.33e-20
cell cortex Hs cellular component 94.4 1.24e-19
membrane Hs cellular component 96.3 2.33e-20
integral component of membrane Hs cellular component 96.3 2.33e-20
cell junction Hs cellular component 94.4 1.24e-19
extracellular matrix Hs cellular component 94.4 1.24e-19
cleavage furrow Hs cellular component 94.4 1.24e-19
synaptic cleft Hs cellular component 96.3 2.33e-20
extracellular exosome Hs cellular component 94.4 1.24e-19
postsynapse Hs cellular component 96.3 2.33e-20

GO (InterProScan)

No result

GO Term Analysis Type e-value