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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S4...' > 
  2. Gene 'Phmamm.CG.MTP2014.S1...' > 
  3. Gene 'Phmamm.CG.MTP2014.S2...' > 
  4. Gene 'Cisavi.CG.ENS81.R759...' > 
  5. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

CARF

Species

P.mammillata

Unique Gene ID

Phmamm.g00008812

Gene Model ID

Phmamm.CG.MTP2014.S444.g08812

Location

S444:114644..116237

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S444.g08812.01.t
Phmamm.CG.MTP2014.S444.g08812.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

18 results

AHC0AAA33YN19

Plate: Plate_33_N19

AHC0AAA40YM08

Plate: Plate_40_M08

AHC0AAA70YG21

Plate: Plate_70_G21

AHC0AAA70YP22

Plate: Plate_70_P22

AHC0AAA80YA15

Plate: Plate_80_A15

AHC0AAA105YK07

Plate: Plate_105_K07

AHC0AAA142YF12

Plate: Plate_142_F12

AHC0AAA147YC15

Plate: Plate_147_C15

AHC0AAA153YB15

Plate: Plate_153_B15

AHC0AAA93YL11

Plate: Plate_93_L11

AHC0AAA147YC13

Plate: Plate_147_C13

AHC0AAA160YI05

Plate: Plate_160_I05

AHC0AAA179YJ23

Plate: Plate_179_J23

AHC0AAA195YL24

Plate: Plate_195_L24

AHC0AAA235YL12

Plate: Plate_235_L12

AHC0AAA242YF17

Plate: Plate_242_F17

AHC0AAA255YN10

Plate: Plate_255_N10

AHC0AAA269YC12

Plate: Plate_269_C12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
CaRF Pfam Calcium-responsive transcription factor

GOSlim

6 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 52.0 2.14e-07
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 52.0 2.14e-07
DNA binding Hs molecular function 52.0 2.14e-07
transcription factor activity, sequence-specific DNA binding Hs molecular function 52.0 2.14e-07
nucleus Hs cellular component 52.0 2.14e-07
nucleoplasm Hs cellular component 52.0 2.14e-07
nucleolus Hs cellular component 52.0 2.14e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value

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