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GENE CARD

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Gene Card

Best human hits

RAB11A; RAB11B; RAB6A

Species

P.mammillata

Unique Gene ID

Phmamm.g00008846

Gene Model ID

Phmamm.CG.MTP2014.S447.g08846

Location

S447:78088..80097

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S447.g08846.02.t
Phmamm.CG.MTP2014.S447.g08846.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

33 results

AHC0AAA17YF10

Plate: Plate_17_F10

AHC0AAA2YD04

Plate: Plate_2_D04

AHC0AAA22YN24

Plate: Plate_22_N24

AHC0AAA3YM19

Plate: Plate_3_M19

AHC0AAA29YH16

Plate: Plate_29_H16

AHC0AAA61YG02

Plate: Plate_61_G02

AHC0AAA66YG16

Plate: Plate_66_G16

AHC0AAA67YL07

Plate: Plate_67_L07

AHC0AAA79YH14

Plate: Plate_79_H14

AHC0AAA110YD07

Plate: Plate_110_D07

AHC0AAA115YD11

Plate: Plate_115_D11

AHC0AAA115YM05

Plate: Plate_115_M05

AHC0AAA116YE05

Plate: Plate_116_E05

AHC0AAA117YN22

Plate: Plate_117_N22

AHC0AAA121YI11

Plate: Plate_121_I11

AHC0AAA136YC06

Plate: Plate_136_C06

AHC0AAA87YJ15

Plate: Plate_87_J15

AHC0AAA87YP03

Plate: Plate_87_P03

AHC0AAA93YA16

Plate: Plate_93_A16

AHC0AAA160YF20

Plate: Plate_160_F20

AHC0AAA178YJ10

Plate: Plate_178_J10

AHC0AAA181YI10

Plate: Plate_181_I10

AHC0AAA184YJ24

Plate: Plate_184_J24

AHC0AAA186YC07

Plate: Plate_186_C07

AHC0AAA191YD19

Plate: Plate_191_D19

AHC0AAA193YP22

Plate: Plate_193_P22

AHC0AAA201YB20

Plate: Plate_201_B20

AHC0AAA223YI05

Plate: Plate_223_I05

AHC0AAA223YL14

Plate: Plate_223_L14

AHC0AAA241YE22

Plate: Plate_241_E22

AHC0AAA241YG23

Plate: Plate_241_G23

AHC0AAA268YB13

Plate: Plate_268_B13

AHC0AAA268YD18

Plate: Plate_268_D18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTPase Pfam Small GTPase superfamily

GOSlim

44 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
nucleotide binding Blast molecular function
GTPase activity Blast molecular function
protein binding Blast molecular function
GTP binding Blast molecular function
cytoplasm Blast cellular component
mitochondrion Blast cellular component
endosome Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Blast cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
microtubule binding Blast molecular function
membrane Blast cellular component
cell junction Blast cellular component
axon Blast cellular component
cytoplasmic vesicle Blast cellular component
vesicle Blast cellular component
macromolecular complex Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
synapse Blast cellular component
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
Golgi apparatus part Blast cellular component
microtubule Blast cellular component
synapse part Blast cellular component
endomembrane system Blast cellular component
neuron part Blast cellular component
anion binding Blast molecular function
guanyl ribonucleotide binding Blast molecular function
purine ribonucleoside binding Blast molecular function
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
cytoskeletal protein binding Blast molecular function
plasma membrane region Blast cellular component
cell adhesion molecule binding Blast molecular function
postsynapse Blast cellular component
intrinsic component of membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

48 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 157 1.03e-47
nucleotide binding Hs molecular function 171 3.58e-53
spindle pole Hs cellular component 171 3.58e-53
GTPase activity Hs molecular function 171 3.58e-53
protein binding Hs molecular function 171 3.58e-53
GTP binding Hs molecular function 171 3.58e-53
cytoplasm Hs cellular component 171 3.58e-53
mitochondrion Hs cellular component 171 3.58e-53
endosome Hs cellular component 171 3.58e-53
multivesicular body Hs cellular component 171 3.58e-53
endoplasmic reticulum membrane Hs cellular component 157 1.03e-47
Golgi apparatus Hs cellular component 171 3.58e-53
trans-Golgi network Hs cellular component 171 3.58e-53
centrosome Hs cellular component 171 3.58e-53
microtubule organizing center Hs cellular component 171 3.58e-53
kinetochore microtubule Hs cellular component 171 3.58e-53
cytosol Hs cellular component 171 3.58e-53
plasma membrane Hs cellular component 171 3.58e-53
microtubule binding Hs molecular function 171 3.58e-53
synaptic vesicle Hs cellular component 169 2.45e-52
membrane Hs cellular component 171 3.58e-53
GDP binding Hs molecular function 169 2.45e-52
protein domain specific binding Hs molecular function 157 1.03e-47
syntaxin binding Hs molecular function 171 3.58e-53
cell junction Hs cellular component 169 2.45e-52
transport vesicle Hs cellular component 171 3.58e-53
axon Hs cellular component 171 3.58e-53
cytoplasmic vesicle membrane Hs cellular component 171 3.58e-53
secretory granule membrane Hs cellular component 157 1.03e-47
phagocytic vesicle membrane Hs cellular component 169 2.45e-52
synaptic vesicle membrane Hs cellular component 169 2.45e-52
cytoplasmic vesicle Hs cellular component 171 3.58e-53
myosin V binding Hs molecular function 171 3.58e-53
vesicle Hs cellular component 171 3.58e-53
cleavage furrow Hs cellular component 171 3.58e-53
trans-Golgi network membrane Hs cellular component 157 1.03e-47
macromolecular complex Hs cellular component 171 3.58e-53
intracellular membrane-bounded organelle Hs cellular component 171 3.58e-53
synapse Hs cellular component 169 2.45e-52
cadherin binding Hs molecular function 169 2.45e-52
phagocytic vesicle Hs cellular component 171 3.58e-53
perinuclear region of cytoplasm Hs cellular component 171 3.58e-53
recycling endosome Hs cellular component 171 3.58e-53
recycling endosome membrane Hs cellular component 171 3.58e-53
extracellular exosome Hs cellular component 171 3.58e-53
endosome to plasma membrane transport vesicle Hs cellular component 157 1.03e-47
postsynaptic recycling endosome Hs cellular component 171 3.58e-53
anchored component of synaptic vesicle membrane Hs cellular component 169 2.45e-52

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 3.5E-52
GTP binding Pfam molecular function 3.5E-52

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