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GENE CARD

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Gene Card

Best human hits

PKD1; PKD1L2; PKD1L3

Species

P.mammillata

Unique Gene ID

Phmamm.g00008898

Gene Model ID

Phmamm.CG.MTP2014.S451.g08898

Location

S451:99025..121709

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S451.g08898.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA19YF02

Plate: Plate_19_F02

AHC0AAA59YB12

Plate: Plate_59_B12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
PKD_dom Pfam PKD domain
PLAT/LH2_dom_sf SUPERFAMILY PLAT/LH2 domain superfamily
PKD/REJ-like Pfam PKD/REJ-like domain
REJ_dom ProSiteProfiles REJ domain
PLAT/LH2_dom ProSiteProfiles PLAT/LH2 domain
PLAT/LH2_dom Pfam PLAT/LH2 domain
PKD/Chitinase_dom SMART PKD/Chitinase domain
PKD_dom ProSiteProfiles PKD domain
PKD_dom_sf SUPERFAMILY PKD domain superfamily
PLAT/LH2_dom SMART PLAT/LH2 domain
Ig-like_fold Gene3D Immunoglobulin-like fold

GOSlim

30 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
calcium ion binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cation transport Blast biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
protein kinase binding Blast molecular function
cell projection Blast cellular component
extracellular exosome Blast cellular component
macromolecular complex Blast cellular component
transmembrane transport Blast biological process
metal ion transport Blast biological process
organelle Blast cellular component
plasma membrane region Blast cellular component
plasma membrane part Blast cellular component
binding Blast molecular function
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
bounding membrane of organelle Blast cellular component
sensory perception Blast biological process
transmembrane signaling receptor activity Blast molecular function
cell projection membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 93.6 3.38e-18
polycystin complex Hs cellular component 93.6 3.38e-18
cation channel activity Hs molecular function 113 1.90e-24
calcium channel activity Hs molecular function 113 1.90e-24
calcium ion binding Hs molecular function 105 5.37e-22
protein binding Hs molecular function 113 1.90e-24
nucleus Hs cellular component 93.6 3.38e-18
cytoplasm Hs cellular component 93.6 3.38e-18
Golgi apparatus Hs cellular component 93.6 3.38e-18
plasma membrane Hs cellular component 113 1.90e-24
integral component of plasma membrane Hs cellular component 93.6 3.38e-18
cilium Hs cellular component 93.6 3.38e-18
cation transmembrane transporter activity Hs molecular function 113 1.90e-24
cell surface Hs cellular component 113 1.90e-24
membrane Hs cellular component 113 1.90e-24
integral component of membrane Hs cellular component 113 1.90e-24
basolateral plasma membrane Hs cellular component 93.6 3.38e-18
lateral plasma membrane Hs cellular component 93.6 3.38e-18
protein kinase binding Hs molecular function 93.6 3.38e-18
protein domain specific binding Hs molecular function 93.6 3.38e-18
carbohydrate binding Hs molecular function 113 1.90e-24
Golgi-associated vesicle membrane Hs cellular component 93.6 3.38e-18
motile cilium Hs cellular component 93.6 3.38e-18
sour taste receptor activity Hs molecular function 113 1.90e-24
cation channel complex Hs cellular component 113 1.90e-24
cell projection Hs cellular component 93.6 3.38e-18
receptor complex Hs cellular component 113 1.90e-24
ion channel binding Hs molecular function 93.6 3.38e-18
ciliary membrane Hs cellular component 93.6 3.38e-18
extracellular exosome Hs cellular component 113 1.90e-24

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.89E-21