Gene Card
Best human hits
MRTO4; RPLP0
Species
Unique Gene ID
Phmamm.g00008906
Gene Model ID
Phmamm.CG.MTP2014.S452.g08906
Location
S452:84148..87434
Transcript Models and Sequences
Phmamm.CG.MTP2014.S452.g08906.01.t
Phmamm.CG.MTP2014.S452.g08906.02.t
Genoscope Yasuo Villefranche
23 results
AHC0AAA10YF24
Plate: Plate_10_F24
AHC0AAA3YL12
Plate: Plate_3_L12
AHC0AAA28YJ12
Plate: Plate_28_J12
AHC0AAA37YD04
Plate: Plate_37_D04
AHC0AAA43YF08
Plate: Plate_43_F08
AHC0AAA43YM22
Plate: Plate_43_M22
AHC0AAA80YL06
Plate: Plate_80_L06
AHC0AAA100YP16
Plate: Plate_100_P16
AHC0AAA109YA19
Plate: Plate_109_A19
AHC0AAA121YK13
Plate: Plate_121_K13
AHC0AAA137YO14
Plate: Plate_137_O14
AHC0AAA146YA10
Plate: Plate_146_A10
AHC0AAA156YD24
Plate: Plate_156_D24
AHC0AAA81YL15
Plate: Plate_81_L15
AHC0AAA93YI02
Plate: Plate_93_I02
AHC0AAA96YB10
Plate: Plate_96_B10
AHC0AAA166YG01
Plate: Plate_166_G01
AHC0AAA166YL05
Plate: Plate_166_L05
AHC0AAA192YJ20
Plate: Plate_192_J20
AHC0AAA260YN16
Plate: Plate_260_N16
AHC0AAA262YM05
Plate: Plate_262_M05
AHC0AAA263YB19
Plate: Plate_263_B19
AHC0AAA267YF21
Plate: Plate_267_F21
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
2 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_L10P | Pfam | Ribosomal protein L10P |
| L10E_eukaryotes | PIRSF | 60S acidic ribosomal protein P0 |
GOSlim
21 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| nucleus | Orthology | cellular component |
| nucleolus | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| focal adhesion | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| extracellular exosome | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
| cytoplasmic part | Orthology | cellular component |
| intracellular non-membrane-bounded organelle | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
GO (Orthology)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| RNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| focal adhesion | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| membrane | Hs | cellular component |
| viral process | Hs | biological process |
| cytosolic large ribosomal subunit | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component |
| ribosome biogenesis | Hs | biological process |
| extracellular exosome | Hs | cellular component |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 434 | 5.09e-154 |
| structural constituent of ribosome | Hs | molecular function | 434 | 5.09e-154 |
| protein binding | Hs | molecular function | 434 | 5.09e-154 |
| intracellular | Hs | cellular component | 434 | 5.09e-154 |
| nucleus | Hs | cellular component | 434 | 5.09e-154 |
| nucleolus | Hs | cellular component | 45.8 | 1.24e-05 |
| cytoplasm | Hs | cellular component | 434 | 5.09e-154 |
| endoplasmic reticulum | Hs | cellular component | 434 | 5.09e-154 |
| cytosol | Hs | cellular component | 434 | 5.09e-154 |
| ribosome | Hs | cellular component | 434 | 5.09e-154 |
| focal adhesion | Hs | cellular component | 434 | 5.09e-154 |
| membrane | Hs | cellular component | 434 | 5.09e-154 |
| cytosolic large ribosomal subunit | Hs | cellular component | 434 | 5.09e-154 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 434 | 5.09e-154 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 434 | 5.09e-154 |
| extracellular exosome | Hs | cellular component | 434 | 5.09e-154 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| intracellular | Pfam | cellular component | 4.8E-24 |
| ribosome biogenesis | PIRSF | biological process | 9.8E-138 |
