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Gene Card

Best human hits

CLIP1; CLIP2; CLIP3

Species

P.mammillata

Unique Gene ID

Phmamm.g00001790

Gene Model ID

Phmamm.CG.MTP2014.S47.g01790

Location

S47:188113..210234

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S47.g01790.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA139YC22

Plate: Plate_139_C22

AHC0AAA193YH12

Plate: Plate_193_H12

AHC0AAA209YJ14

Plate: Plate_209_J14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
CAP-Gly_domain ProSiteProfiles CAP Gly-rich domain
CAP-Gly_dom_sf Gene3D CAP Gly-rich domain superfamily
CAP-Gly_domain SMART CAP Gly-rich domain
CAP-Gly_domain ProSitePatterns CAP Gly-rich domain
CAP-Gly_domain Pfam CAP Gly-rich domain
CAP-Gly_dom_sf SUPERFAMILY CAP Gly-rich domain superfamily

GOSlim

37 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
protein binding Orthology molecular function
nuclear envelope Orthology cellular component
cytoplasm Orthology cellular component
endosome Orthology cellular component
Golgi apparatus Blast cellular component
centrosome Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
plasma membrane Blast cellular component
microtubule binding Orthology molecular function
zinc ion binding Orthology molecular function
microtubule cytoskeleton Orthology cellular component
tubulin binding Orthology molecular function
membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
protein homodimerization activity Orthology molecular function
cell projection Orthology cellular component
membrane raft Blast cellular component
metal ion binding Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
microtubule-based process Orthology biological process
organelle organization Orthology biological process
plasma membrane region Orthology cellular component
cell leading edge Orthology cellular component
cytoskeletal part Orthology cellular component
cytoplasmic part Orthology cellular component
organelle membrane Orthology cellular component
Golgi apparatus part Blast cellular component
whole membrane Blast cellular component
early endosome Blast cellular component
bounding membrane of organelle Blast cellular component
Golgi membrane Blast cellular component
carbohydrate derivative binding Blast molecular function

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
mitotic cell cycle Hs biological process
kinetochore Hs cellular component
microtubule bundle formation Hs biological process
ruffle Hs cellular component
nucleic acid binding Hs molecular function
protein binding Hs molecular function
nuclear envelope Hs cellular component
cytoplasm Hs cellular component
endosome Hs cellular component
centrosome Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
microtubule associated complex Hs cellular component
cytoplasmic microtubule Hs cellular component
intermediate filament Hs cellular component
sister chromatid cohesion Hs biological process
microtubule binding Hs molecular function
zinc ion binding Hs molecular function
microtubule cytoskeleton Hs cellular component
tubulin binding Hs molecular function
membrane Hs cellular component
cytoplasmic vesicle membrane Hs cellular component
positive regulation of microtubule polymerization Hs biological process
cytoplasmic vesicle Hs cellular component
microtubule plus-end Hs cellular component
protein homodimerization activity Hs molecular function
cell projection Hs cellular component
macropinosome Hs cellular component
metal ion binding Hs molecular function
microtubule plus-end binding Hs molecular function

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
kinetochore Hs cellular component 405 2.64e-116
ruffle Hs cellular component 405 2.64e-116
nucleic acid binding Hs molecular function 405 2.64e-116
protein binding Hs molecular function 405 2.64e-116
nuclear envelope Hs cellular component 405 2.64e-116
cytoplasm Hs cellular component 405 2.64e-116
endosome Hs cellular component 405 2.64e-116
Golgi apparatus Hs cellular component 172 1.06e-44
Golgi stack Hs cellular component 172 1.06e-44
trans-Golgi network Hs cellular component 172 1.06e-44
centrosome Hs cellular component 405 2.64e-116
cytosol Hs cellular component 405 2.64e-116
cytoskeleton Hs cellular component 405 2.64e-116
microtubule Hs cellular component 405 2.64e-116
microtubule associated complex Hs cellular component 350 1.26e-100
cytoplasmic microtubule Hs cellular component 405 2.64e-116
intermediate filament Hs cellular component 405 2.64e-116
plasma membrane Hs cellular component 172 1.06e-44
microtubule binding Hs molecular function 405 2.64e-116
zinc ion binding Hs molecular function 405 2.64e-116
microtubule cytoskeleton Hs cellular component 405 2.64e-116
tubulin binding Hs molecular function 405 2.64e-116
membrane Hs cellular component 405 2.64e-116
cytoplasmic vesicle membrane Hs cellular component 405 2.64e-116
cytoplasmic vesicle Hs cellular component 405 2.64e-116
early endosome membrane Hs cellular component 172 1.06e-44
trans-Golgi network membrane Hs cellular component 172 1.06e-44
microtubule plus-end Hs cellular component 405 2.64e-116
ganglioside binding Hs molecular function 172 1.06e-44
protein homodimerization activity Hs molecular function 405 2.64e-116
cell projection Hs cellular component 405 2.64e-116
macropinosome Hs cellular component 405 2.64e-116
membrane raft Hs cellular component 172 1.06e-44
metal ion binding Hs molecular function 405 2.64e-116
microtubule plus-end binding Hs molecular function 405 2.64e-116
recycling endosome membrane Hs cellular component 172 1.06e-44

GO (InterProScan)

No result

GO Term Analysis Type e-value

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