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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

PJA2; RNF115; RNF126

Species

P.mammillata

Unique Gene ID

Phmamm.g00001795

Gene Model ID

Phmamm.CG.MTP2014.S47.g01795

Location

S47:244805..251031

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S47.g01795.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

26 results

AHC0AAA22YK01

Plate: Plate_22_K01

AHC0AAA4YO18

Plate: Plate_4_O18

AHC0AAA30YK04

Plate: Plate_30_K04

AHC0AAA31YP03

Plate: Plate_31_P03

AHC0AAA33YH07

Plate: Plate_33_H07

AHC0AAA34YO14

Plate: Plate_34_O14

AHC0AAA43YL24

Plate: Plate_43_L24

AHC0AAA61YE09

Plate: Plate_61_E09

AHC0AAA68YE22

Plate: Plate_68_E22

AHC0AAA105YJ22

Plate: Plate_105_J22

AHC0AAA113YD20

Plate: Plate_113_D20

AHC0AAA115YP13

Plate: Plate_115_P13

AHC0AAA119YA10

Plate: Plate_119_A10

AHC0AAA120YE09

Plate: Plate_120_E09

AHC0AAA126YI09

Plate: Plate_126_I09

AHC0AAA136YI08

Plate: Plate_136_I08

AHC0AAA137YL23

Plate: Plate_137_L23

AHC0AAA152YL15

Plate: Plate_152_L15

AHC0AAA155YC12

Plate: Plate_155_C12

AHC0AAA84YG20

Plate: Plate_84_G20

AHC0AAA167YN16

Plate: Plate_167_N16

AHC0AAA172YH24

Plate: Plate_172_H24

AHC0AAA185YL14

Plate: Plate_185_L14

AHC0AAA190YD24

Plate: Plate_190_D24

AHC0AAA196YM06

Plate: Plate_196_M06

AHC0AAA197YE11

Plate: Plate_197_E11

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_RING Pfam Zinc finger, RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING SMART Zinc finger, RING-type

GOSlim

30 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
protein polyubiquitination Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Blast cellular component
cytosol Orthology cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
cell junction Blast cellular component
regulation of cell proliferation Orthology biological process
synapse Blast cellular component
postsynaptic membrane Blast cellular component
metal ion binding Orthology molecular function
receptor binding Orthology molecular function
proteolysis Orthology biological process
cell surface receptor signaling pathway Orthology biological process
negative regulation of signal transduction Orthology biological process
vacuole Orthology cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
protein kinase binding Blast molecular function
cytoskeleton Blast cellular component

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
epidermal growth factor receptor binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
ubiquitin-dependent protein catabolic process Hs biological process
protein monoubiquitination Hs biological process
protein ubiquitination Hs biological process
transferase activity Hs molecular function
negative regulation of epidermal growth factor receptor signaling pathway Hs biological process
regulation of cell proliferation Hs biological process
retrograde transport, endosome to Golgi Hs biological process
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway Hs biological process
metal ion binding Hs molecular function
protein autoubiquitination Hs biological process
ubiquitin protein ligase activity Hs molecular function
protein K63-linked ubiquitination Hs biological process
protein K48-linked ubiquitination Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 69.7 1.18e-14
ubiquitin-protein transferase activity Hs molecular function 115 4.80e-32
epidermal growth factor receptor binding Hs molecular function 96.3 1.10e-24
protein binding Hs molecular function 115 4.80e-32
nucleus Hs cellular component 96.3 1.10e-24
nucleoplasm Hs cellular component 96.3 1.10e-24
cytoplasm Hs cellular component 115 4.80e-32
endoplasmic reticulum Hs cellular component 69.7 1.18e-14
endoplasmic reticulum membrane Hs cellular component 69.7 1.18e-14
Golgi apparatus Hs cellular component 69.7 1.18e-14
cytosol Hs cellular component 115 4.80e-32
plasma membrane Hs cellular component 69.7 1.18e-14
postsynaptic density Hs cellular component 69.7 1.18e-14
membrane Hs cellular component 69.7 1.18e-14
transferase activity Hs molecular function 115 4.80e-32
cell junction Hs cellular component 69.7 1.18e-14
protein kinase A catalytic subunit binding Hs molecular function 69.7 1.18e-14
protein kinase A regulatory subunit binding Hs molecular function 69.7 1.18e-14
intermediate filament cytoskeleton Hs cellular component 69.7 1.18e-14
synapse Hs cellular component 69.7 1.18e-14
postsynaptic membrane Hs cellular component 69.7 1.18e-14
metal ion binding Hs molecular function 115 4.80e-32
ubiquitin protein ligase activity Hs molecular function 115 4.80e-32

GO (InterProScan)

No result

GO Term Analysis Type e-value