Gene Card
Best human hits
DDX39B
Species
Unique Gene ID
Phmamm.g00009135
Gene Model ID
Phmamm.CG.MTP2014.S473.g09135
Location
S473:17639..20368
Transcript Models and Sequences
AHC0AAA11YI05
Plate: Plate_11_I05
AHC0AAA16YD03
Plate: Plate_16_D03
AHC0AAA17YD02
Plate: Plate_17_D02
AHC0AAA17YM09
Plate: Plate_17_M09
AHC0AAA2YI21
Plate: Plate_2_I21
AHC0AAA20YD07
Plate: Plate_20_D07
AHC0AAA20YH06
Plate: Plate_20_H06
AHC0AAA4YF12
Plate: Plate_4_F12
AHC0AAA5YH14
Plate: Plate_5_H14
AHC0AAA32YL17
Plate: Plate_32_L17
AHC0AAA36YF05
Plate: Plate_36_F05
AHC0AAA38YB07
Plate: Plate_38_B07
AHC0AAA45YK16
Plate: Plate_45_K16
AHC0AAA50YG13
Plate: Plate_50_G13
AHC0AAA55YL17
Plate: Plate_55_L17
AHC0AAA59YN15
Plate: Plate_59_N15
AHC0AAA62YF01
Plate: Plate_62_F01
AHC0AAA65YA06
Plate: Plate_65_A06
AHC0AAA69YJ24
Plate: Plate_69_J24
AHC0AAA71YN13
Plate: Plate_71_N13
AHC0AAA74YI08
Plate: Plate_74_I08
AHC0AAA79YK20
Plate: Plate_79_K20
AHC0AAA80YO22
Plate: Plate_80_O22
AHC0AAA121YF23
Plate: Plate_121_F23
AHC0AAA129YA13
Plate: Plate_129_A13
AHC0AAA136YP16
Plate: Plate_136_P16
AHC0AAA140YB08
Plate: Plate_140_B08
AHC0AAA150YL12
Plate: Plate_150_L12
AHC0AAA89YC24
Plate: Plate_89_C24
AHC0AAA96YD06
Plate: Plate_96_D06
AHC0AAA98YC03
Plate: Plate_98_C03
AHC0AAA98YG08
Plate: Plate_98_G08
AHC0AAA167YC11
Plate: Plate_167_C11
AHC0AAA187YA24
Plate: Plate_187_A24
AHC0AAA192YO13
Plate: Plate_192_O13
AHC0AAA207YL13
Plate: Plate_207_L13
AHC0AAA213YC21
Plate: Plate_213_C21
AHC0AAA218YP15
Plate: Plate_218_P15
AHC0AAA222YP24
Plate: Plate_222_P24
AHC0AAA235YD17
Plate: Plate_235_D17
AHC0AAA237YE16
Plate: Plate_237_E16
AHC0AAA258YJ05
Plate: Plate_258_J05
AHC0AAA258YK08
Plate: Plate_258_K08
AHC0AAA261YL14
Plate: Plate_261_L14
AHC0AAA262YI23
Plate: Plate_262_I23
AHC0AAA264YG13
Plate: Plate_264_G13
AHC0AAA265YF20
Plate: Plate_265_F20
AHC0AAA38YB05
Plate: Plate_38_B05
AHC0AAA55YN19
Plate: Plate_55_N19
AHC0AAA98YC01
Plate: Plate_98_C01
AHC0AAA98YG06
Plate: Plate_98_G06
n/a
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IPR Term | Analysis | Definition |
---|---|---|
RNA_helicase_DEAD_Q_motif | ProSiteProfiles | RNA helicase, DEAD-box type, Q motif |
Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
Helicase_C | SMART | Helicase, C-terminal |
Helicase_C | ProSiteProfiles | Helicase, C-terminal |
Helicase_C | Pfam | Helicase, C-terminal |
P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
Helicase_C | CDD | Helicase, C-terminal |
GO Term | Annotation Origin | Type |
---|---|---|
nucleotide binding | Orthology | molecular function |
mRNA splicing, via spliceosome | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
ATP binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Orthology | cellular component |
mRNA processing | Orthology | biological process |
RNA splicing | Orthology | biological process |
nuclear speck | Orthology | cellular component |
hydrolase activity | Orthology | molecular function |
identical protein binding | Orthology | molecular function |
cellular response to DNA damage stimulus | Orthology | biological process |
regulation of gene expression | Orthology | biological process |
membrane | Orthology | cellular component |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
animal organ development | Orthology | biological process |
nucleoside-triphosphatase activity | Orthology | molecular function |
transcription from RNA polymerase II promoter | Orthology | biological process |
organic substance transport | Orthology | biological process |
intracellular transport | Orthology | biological process |
intracellular protein transport | Orthology | biological process |
gene expression | Orthology | biological process |
RNA metabolic process | Orthology | biological process |
nuclear lumen | Orthology | cellular component |
positive regulation of transcription, DNA-templated | Orthology | biological process |
positive regulation of gene expression | Orthology | biological process |
cell cycle | Orthology | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
nucleotide binding | Hs | molecular function |
spliceosomal complex assembly | Hs | biological process |
transcription export complex | Hs | cellular component |
mRNA splicing, via spliceosome | Hs | biological process |
liver development | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
ATP-dependent RNA helicase activity | Hs | molecular function |
helicase activity | Hs | molecular function |
protein binding | Hs | molecular function |
ATP binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
spliceosomal complex | Hs | cellular component |
U4 snRNP | Hs | cellular component |
U6 snRNP | Hs | cellular component |
nucleolus | Hs | cellular component |
cytoplasm | Hs | cellular component |
termination of RNA polymerase II transcription | Hs | biological process |
mRNA processing | Hs | biological process |
RNA export from nucleus | Hs | biological process |
mRNA export from nucleus | Hs | biological process |
RNA-dependent ATPase activity | Hs | molecular function |
RNA splicing | Hs | biological process |
RNA secondary structure unwinding | Hs | biological process |
nuclear matrix | Hs | cellular component |
nuclear speck | Hs | cellular component |
hydrolase activity | Hs | molecular function |
ATPase activity | Hs | molecular function |
U6 snRNA binding | Hs | molecular function |
U4 snRNA binding | Hs | molecular function |
mRNA 3'-end processing | Hs | biological process |
positive regulation of DNA-templated transcription, elongation | Hs | biological process |
identical protein binding | Hs | molecular function |
ATP-dependent protein binding | Hs | molecular function |
positive regulation of translation | Hs | biological process |
mRNA transport | Hs | biological process |
negative regulation of DNA damage checkpoint | Hs | biological process |
cellular response to DNA damage stimulus | Hs | biological process |
regulation of gene expression | Hs | biological process |
membrane | Hs | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleotide binding | Hs | molecular function | 748 | 0.0 |
transcription export complex | Hs | cellular component | 748 | 0.0 |
nucleic acid binding | Hs | molecular function | 748 | 0.0 |
RNA binding | Hs | molecular function | 748 | 0.0 |
ATP-dependent RNA helicase activity | Hs | molecular function | 748 | 0.0 |
helicase activity | Hs | molecular function | 748 | 0.0 |
protein binding | Hs | molecular function | 748 | 0.0 |
ATP binding | Hs | molecular function | 748 | 0.0 |
nucleus | Hs | cellular component | 748 | 0.0 |
nucleoplasm | Hs | cellular component | 748 | 0.0 |
spliceosomal complex | Hs | cellular component | 748 | 0.0 |
U4 snRNP | Hs | cellular component | 748 | 0.0 |
U6 snRNP | Hs | cellular component | 748 | 0.0 |
nucleolus | Hs | cellular component | 748 | 0.0 |
cytoplasm | Hs | cellular component | 748 | 0.0 |
RNA-dependent ATPase activity | Hs | molecular function | 748 | 0.0 |
nuclear matrix | Hs | cellular component | 748 | 0.0 |
nuclear speck | Hs | cellular component | 748 | 0.0 |
hydrolase activity | Hs | molecular function | 748 | 0.0 |
ATPase activity | Hs | molecular function | 748 | 0.0 |
U6 snRNA binding | Hs | molecular function | 748 | 0.0 |
U4 snRNA binding | Hs | molecular function | 748 | 0.0 |
identical protein binding | Hs | molecular function | 748 | 0.0 |
ATP-dependent protein binding | Hs | molecular function | 748 | 0.0 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | Pfam | molecular function | 1.6E-38 |
ATP binding | Pfam | molecular function | 1.6E-38 |