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GENE CARD

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Gene Card

Best human hits

RDH11; RDH12; RDH14

Species

P.mammillata

Unique Gene ID

Phmamm.g00009306

Gene Model ID

Phmamm.CG.MTP2014.S485.g09306

Location

S485:116380..120335

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S485.g09306.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily
SDR_fam Pfam Short-chain dehydrogenase/reductase SDR
SDR_fam PRINTS Short-chain dehydrogenase/reductase SDR

GOSlim

15 results

GO Term Annotation Origin Type
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
mitochondrion Blast cellular component
lysosomal membrane Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
oxidation-reduction process Blast biological process
neuron part Blast cellular component
catalytic activity Blast molecular function
organic substance metabolic process Blast biological process
cellular metabolic process Blast biological process
plasma membrane region Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
photoreceptor inner segment Hs cellular component 169 8.99e-50
retinol dehydrogenase activity Hs molecular function 171 2.13e-50
protein binding Hs molecular function 171 2.13e-50
intracellular Hs cellular component 171 2.13e-50
nucleus Hs cellular component 161 2.29e-46
mitochondrion Hs cellular component 161 2.29e-46
lysosomal membrane Hs cellular component 161 2.29e-46
endoplasmic reticulum Hs cellular component 169 8.99e-50
endoplasmic reticulum membrane Hs cellular component 169 8.99e-50
alcohol dehydrogenase (NADP+) activity Hs molecular function 161 2.29e-46
membrane Hs cellular component 169 8.99e-50
integral component of membrane Hs cellular component 169 8.99e-50
oxidoreductase activity Hs molecular function 171 2.13e-50
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function 169 8.99e-50
NADP-retinol dehydrogenase activity Hs molecular function 171 2.13e-50
photoreceptor inner segment membrane Hs cellular component 171 2.13e-50

GO (InterProScan)

No result

GO Term Analysis Type e-value