Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LASP1; NEB; NEBL

Species

P.mammillata

Unique Gene ID

Phmamm.g00009314

Gene Model ID

Phmamm.CG.MTP2014.S486.g09314

Location

S486:94544..104679

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S486.g09314.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

26 results

AHC0AAA19YO17

Plate: Plate_19_O17

AHC0AAA8YE21

Plate: Plate_8_E21

AHC0AAA31YN20

Plate: Plate_31_N20

AHC0AAA32YJ21

Plate: Plate_32_J21

AHC0AAA42YG15

Plate: Plate_42_G15

AHC0AAA43YH04

Plate: Plate_43_H04

AHC0AAA47YD04

Plate: Plate_47_D04

AHC0AAA49YI04

Plate: Plate_49_I04

AHC0AAA77YJ23

Plate: Plate_77_J23

AHC0AAA117YF18

Plate: Plate_117_F18

AHC0AAA128YI05

Plate: Plate_128_I05

AHC0AAA129YK10

Plate: Plate_129_K10

AHC0AAA138YN17

Plate: Plate_138_N17

AHC0AAA148YM20

Plate: Plate_148_M20

AHC0AAA149YA20

Plate: Plate_149_A20

AHC0AAA149YD23

Plate: Plate_149_D23

AHC0AAA154YG07

Plate: Plate_154_G07

AHC0AAA87YD04

Plate: Plate_87_D04

AHC0AAA165YM03

Plate: Plate_165_M03

AHC0AAA176YJ07

Plate: Plate_176_J07

AHC0AAA181YG10

Plate: Plate_181_G10

AHC0AAA188YG09

Plate: Plate_188_G09

AHC0AAA210YK02

Plate: Plate_210_K02

AHC0AAA234YI11

Plate: Plate_234_I11

AHC0AAA243YB08

Plate: Plate_243_B08

AHC0AAA243YB20

Plate: Plate_243_B20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
SH3_domain Pfam SH3 domain
SH3_domain SMART SH3 domain
SH3_domain PRINTS SH3 domain
SH3_domain ProSiteProfiles SH3 domain

GOSlim

20 results

GO Term Annotation Origin Type
actin binding Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
focal adhesion Blast cellular component
ion transport Blast biological process
cytoskeletal protein binding Blast molecular function
positive regulation of signal transduction Blast biological process
metal ion binding Blast molecular function
actin filament binding Blast molecular function
extracellular exosome Blast cellular component
cytoskeletal part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
structural molecule activity Blast molecular function
transmembrane transport Blast biological process
intracellular non-membrane-bounded organelle Blast cellular component
organelle part Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
stress fiber Hs cellular component 74.7 3.53e-16
actin binding Hs molecular function 74.7 8.69e-17
SH3/SH2 adaptor activity Hs molecular function 74.7 8.69e-17
protein binding Hs molecular function 74.7 8.69e-17
tropomyosin binding Hs molecular function 74.7 3.53e-16
cytoplasm Hs cellular component 74.7 8.69e-17
cytosol Hs cellular component 71.6 4.10e-15
cytoskeleton Hs cellular component 74.7 8.69e-17
focal adhesion Hs cellular component 74.7 8.69e-17
cell cortex Hs cellular component 74.7 8.69e-17
cytoskeletal protein binding Hs molecular function 74.7 3.53e-16
structural constituent of muscle Hs molecular function 74.7 3.53e-16
ion transmembrane transporter activity Hs molecular function 74.7 8.69e-17
actin cytoskeleton Hs cellular component 71.6 4.10e-15
myofibril Hs cellular component 71.6 4.10e-15
sarcomere Hs cellular component 71.6 4.10e-15
Z disc Hs cellular component 74.7 3.53e-16
cortical actin cytoskeleton Hs cellular component 74.7 8.69e-17
filamin binding Hs molecular function 74.7 3.53e-16
I band Hs cellular component 74.7 3.53e-16
contractile fiber Hs cellular component 71.6 4.10e-15
cadherin binding Hs molecular function 74.7 8.69e-17
metal ion binding Hs molecular function 74.7 8.69e-17
actin filament binding Hs molecular function 74.7 8.69e-17
extracellular exosome Hs cellular component 74.7 8.69e-17

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 2.1E-21