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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...' > 
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Gene Card

Best human hits

MYL2; MYL5; MYL7

Species

P.mammillata

Unique Gene ID

Phmamm.g00001862

Gene Model ID

Phmamm.CG.MTP2014.S49.g01862

Location

S49:252371..256181

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S49.g01862.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA4YD16

Plate: Plate_4_D16

AHC0AAA76YO08

Plate: Plate_76_O08

AHC0AAA167YH23

Plate: Plate_167_H23

AHC0AAA178YO11

Plate: Plate_178_O11

AHC0AAA256YM09

Plate: Plate_256_M09

AHC0AAA261YJ24

Plate: Plate_261_J24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
EF_hand_dom Pfam EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF_hand_dom ProSiteProfiles EF-hand domain
EF_hand_dom SMART EF-hand domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair

GOSlim

26 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
heart development Orthology biological process
metal ion binding Orthology molecular function
mitochondrion Orthology cellular component
lysosomal membrane Orthology cellular component
immune response Orthology biological process
anatomical structure morphogenesis Orthology biological process
actin binding Orthology molecular function
cytoplasmic part Orthology cellular component
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
structural molecule activity Orthology molecular function
multicellular organism development Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
organelle part Orthology cellular component
cellular component organization Orthology biological process
cytoskeletal protein binding Orthology molecular function
anatomical structure development Orthology biological process
cell differentiation Orthology biological process
cell development Orthology biological process
animal organ development Orthology biological process
postsynapse Blast cellular component

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
heart morphogenesis Hs biological process
actin monomer binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
muscle myosin complex Hs cellular component
muscle contraction Hs biological process
regulation of striated muscle contraction Hs biological process
heart development Hs biological process
structural constituent of muscle Hs molecular function
post-embryonic development Hs biological process
actin cytoskeleton Hs cellular component
myosin complex Hs cellular component
myofibril Hs cellular component
sarcomere Hs cellular component
negative regulation of cell growth Hs biological process
A band Hs cellular component
myosin heavy chain binding Hs molecular function
muscle cell fate specification Hs biological process
metal ion binding Hs molecular function
muscle fiber development Hs biological process
cardiac myofibril assembly Hs biological process
ventricular cardiac muscle tissue morphogenesis Hs biological process
heart contraction Hs biological process
cardiac muscle contraction Hs biological process
cardiac myofibril Hs cellular component
mitochondrion Hs cellular component
lysosomal membrane Hs cellular component
immune response Hs biological process
skeletal muscle tissue development Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
actin monomer binding Hs molecular function 166 2.84e-53
calcium ion binding Hs molecular function 177 2.59e-57
protein binding Hs molecular function 166 2.84e-53
cytoplasm Hs cellular component 166 2.84e-53
cytosol Hs cellular component 177 2.59e-57
cytoskeleton Hs cellular component 166 2.84e-53
muscle myosin complex Hs cellular component 177 2.59e-57
structural constituent of muscle Hs molecular function 177 2.59e-57
actin cytoskeleton Hs cellular component 166 2.84e-53
myosin complex Hs cellular component 177 2.59e-57
myofibril Hs cellular component 166 2.84e-53
sarcomere Hs cellular component 166 2.84e-53
A band Hs cellular component 166 2.84e-53
myosin heavy chain binding Hs molecular function 166 2.84e-53
dendritic spine Hs cellular component 152 3.27e-47
metal ion binding Hs molecular function 177 2.59e-57
cardiac myofibril Hs cellular component 166 2.84e-53

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 1.2E-5

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