Aniseed - Gene card

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Genoscope Yasuo Villefranche

3 results

AHC0AAA221YK06

Plate: Plate_221_K06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

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Gene Annotations

InterPro

14 results

IPR Term	Analysis	Definition
Homeobox_dom	SMART	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	Pfam	Homeobox domain
Paired_dom	PRINTS	Paired domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
Paired_dom	ProSiteProfiles	Paired domain
Homeobox_dom	CDD	Homeobox domain
Paired_dom	CDD	Paired domain
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Paired_dom	ProSitePatterns	Paired domain
OAR_dom	ProSiteProfiles	OAR domain
Paired_dom	Pfam	Paired domain
Paired_dom	SMART	Paired domain

GOSlim

35 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
multicellular organism development	Orthology	biological process
transcription factor binding	Blast	molecular function
anatomical structure morphogenesis	Orthology	biological process
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
protein kinase binding	Blast	molecular function
cell differentiation	Orthology	biological process
ubiquitin protein ligase binding	Blast	molecular function
negative regulation of apoptotic process	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Blast	molecular function
double-stranded DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
animal organ development	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
response to organic substance	Orthology	biological process
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
multicellular organism development	Hs	biological process
animal organ morphogenesis	Hs	biological process
cell differentiation	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
retina development in camera-type eye	Hs	biological process
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
double-stranded DNA binding	Hs	molecular function
circadian rhythm	Hs	biological process
pancreas development	Hs	biological process
endocrine pancreas development	Hs	biological process
response to drug	Hs	biological process
regulation of cell differentiation	Hs	biological process
positive regulation of cell differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
response to cAMP	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	249	6.71e-76
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	249	6.71e-76
RNA polymerase II core promoter sequence-specific DNA binding	Hs	molecular function	249	6.71e-76
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	369	3.99e-121
transcription factor activity, RNA polymerase II core promoter sequence-specific	Hs	molecular function	360	1.27e-117
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	249	6.71e-76
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	249	6.71e-76
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	249	6.71e-76
DNA binding	Hs	molecular function	369	3.99e-121
chromatin binding	Hs	molecular function	249	6.71e-76
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	369	3.99e-121
ubiquitin-protein transferase activity	Hs	molecular function	249	6.71e-76
protein binding	Hs	molecular function	369	3.99e-121
intracellular	Hs	cellular component	249	6.71e-76
nucleus	Hs	cellular component	369	3.99e-121
nucleoplasm	Hs	cellular component	369	3.99e-121
cytoplasm	Hs	cellular component	249	6.71e-76
cytosol	Hs	cellular component	249	6.71e-76
transcription factor binding	Hs	molecular function	249	6.71e-76
membrane	Hs	cellular component	249	6.71e-76
integral component of membrane	Hs	cellular component	249	6.71e-76
protein kinase binding	Hs	molecular function	249	6.71e-76
ubiquitin protein ligase binding	Hs	molecular function	249	6.71e-76
histone acetyltransferase binding	Hs	molecular function	249	6.71e-76
sequence-specific DNA binding	Hs	molecular function	369	3.99e-121
transcription regulatory region DNA binding	Hs	molecular function	249	6.71e-76
co-SMAD binding	Hs	molecular function	249	6.71e-76
R-SMAD binding	Hs	molecular function	249	6.71e-76
HMG box domain binding	Hs	molecular function	369	3.99e-121

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	3.1E-86
regulation of transcription, DNA-templated	SMART	biological process	3.1E-86
sequence-specific DNA binding	ProSitePatterns	molecular function

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