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GENE CARD

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Gene Card

Best human hits

NLRP3; NOD1; NOD2

Species

P.mammillata

Unique Gene ID

Phmamm.g00018629

Gene Model ID

Phmamm.CG.MTP2014.S4966.g18629

Location

S4966:840..2590

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4966.g18629.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Leu-rich_rpt Pfam Leucine-rich repeat
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily

GOSlim

31 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
actin binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
transcription factor binding Blast molecular function
cell surface Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
sequence-specific DNA binding Blast molecular function
nuclear part Blast cellular component
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 63.5 1.01e-11
actin binding Hs molecular function 63.5 1.01e-11
protein binding Hs molecular function 63.5 1.01e-11
ATP binding Hs molecular function 63.5 1.01e-11
extracellular region Hs cellular component 57.8 8.94e-10
nucleus Hs cellular component 57.8 8.94e-10
cytoplasm Hs cellular component 63.5 1.01e-11
mitochondrion Hs cellular component 63.5 1.01e-11
endoplasmic reticulum Hs cellular component 57.8 8.94e-10
Golgi apparatus Hs cellular component 63.5 1.01e-11
cytosol Hs cellular component 63.5 1.01e-11
cytoskeleton Hs cellular component 63.5 1.01e-11
plasma membrane Hs cellular component 63.5 1.01e-11
transcription factor binding Hs molecular function 57.8 8.94e-10
COP9 signalosome Hs cellular component 63.5 1.01e-11
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 52.4 5.34e-08
cell surface Hs cellular component 63.5 1.01e-11
membrane Hs cellular component 63.5 1.01e-11
basolateral plasma membrane Hs cellular component 63.5 1.01e-11
apical plasma membrane Hs cellular component 52.4 5.34e-08
enzyme binding Hs molecular function 63.5 1.01e-11
protein kinase binding Hs molecular function 63.5 1.01e-11
Hsp70 protein binding Hs molecular function 63.5 1.01e-11
vesicle Hs cellular component 63.5 1.01e-11
muramyl dipeptide binding Hs molecular function 63.5 1.01e-11
macromolecular complex Hs cellular component 63.5 1.01e-11
identical protein binding Hs molecular function 57.8 8.94e-10
protein homodimerization activity Hs molecular function 52.4 5.34e-08
peptidoglycan binding Hs molecular function 63.5 1.01e-11
sequence-specific DNA binding Hs molecular function 57.8 8.94e-10
CARD domain binding Hs molecular function 63.5 1.01e-11
Hsp90 protein binding Hs molecular function 63.5 1.01e-11
inflammasome complex Hs cellular component 57.8 8.94e-10
NLRP3 inflammasome complex Hs cellular component 57.8 8.94e-10

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 6.5E-4