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Gene Card

Best human hits

ZEB1; ZEB2; ZNF232

Species

P.mammillata

Unique Gene ID

Phmamm.g00009503

Gene Model ID

Phmamm.CG.MTP2014.S502.g09503

Location

S502:84312..91364

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA100YE10

Plate: Plate_100_E10

AHC0AAA112YJ07

Plate: Plate_112_J07

AHC0AAA81YN06

Plate: Plate_81_N06

AHC0AAA83YE24

Plate: Plate_83_E24

AHC0AAA188YH16

Plate: Plate_188_H16

AHC0AAA192YB09

Plate: Plate_192_B09

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type Pfam Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

27 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Blast biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
transcription corepressor activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytosol Blast cellular component
transcription factor binding Blast molecular function
zinc ion binding Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
sequence-specific DNA binding Blast molecular function
metal ion binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
intracellular part Blast cellular component
macromolecular complex Blast cellular component
dephosphorylation Blast biological process
enzyme binding Blast molecular function
hydrolase activity Blast molecular function
enzyme regulator activity Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 173 1.80e-44
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 177 1.50e-45
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 173 1.80e-44
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 177 1.50e-45
nucleic acid binding Hs molecular function 177 1.50e-45
DNA binding Hs molecular function 177 1.50e-45
chromatin binding Hs molecular function 177 1.50e-45
transcription factor activity, sequence-specific DNA binding Hs molecular function 177 1.50e-45
transcription coactivator activity Hs molecular function 177 1.50e-45
transcription corepressor activity Hs molecular function 177 1.50e-45
protein binding Hs molecular function 177 1.50e-45
nucleus Hs cellular component 177 1.50e-45
nucleoplasm Hs cellular component 177 1.50e-45
transcription factor complex Hs cellular component 177 1.50e-45
nucleolus Hs cellular component 173 1.80e-44
cytosol Hs cellular component 177 1.50e-45
transcription factor binding Hs molecular function 177 1.50e-45
zinc ion binding Hs molecular function 177 1.50e-45
phosphatase regulator activity Hs molecular function 173 1.80e-44
intracellular membrane-bounded organelle Hs cellular component 104 1.36e-23
sequence-specific DNA binding Hs molecular function 173 1.80e-44
metal ion binding Hs molecular function 177 1.50e-45
R-SMAD binding Hs molecular function 173 1.80e-44
E-box binding Hs molecular function 177 1.50e-45

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 0.002





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