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Gene Card

Best human hits

HECTD2; HERC3; UBE3A

Species

P.mammillata

Unique Gene ID

Phmamm.g00009550

Gene Model ID

Phmamm.CG.MTP2014.S506.g09550

Location

S506:75344..92920

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S506.g09550.01.t
Phmamm.CG.MTP2014.S506.g09550.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA22YF16

Plate: Plate_22_F16

AHC0AAA32YK16

Plate: Plate_32_K16

AHC0AAA130YM14

Plate: Plate_130_M14

AHC0AAA133YA01

Plate: Plate_133_A01

AHC0AAA135YA06

Plate: Plate_135_A06

AHC0AAA136YM20

Plate: Plate_136_M20

AHC0AAA147YF16

Plate: Plate_147_F16

AHC0AAA98YK05

Plate: Plate_98_K05

AHC0AAA133YC03

Plate: Plate_133_C03

AHC0AAA147YF14

Plate: Plate_147_F14

AHC0AAA179YP24

Plate: Plate_179_P24

AHC0AAA193YJ04

Plate: Plate_193_J04

AHC0AAA197YC12

Plate: Plate_197_C12

AHC0AAA209YE06

Plate: Plate_209_E06

AHC0AAA215YK22

Plate: Plate_215_K22

AHC0AAA245YD06

Plate: Plate_245_D06

AHC0AAA257YF01

Plate: Plate_257_F01

AHC0AAA265YL05

Plate: Plate_265_L05

AHC0AAA98YM07

Plate: Plate_98_M07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HECT_dom Pfam HECT domain
Hect_E3_ubiquitin_ligase SUPERFAMILY HECT, E3 ligase catalytic domain
HECT_dom CDD HECT domain
HECT_dom SMART HECT domain
HECT_dom ProSiteProfiles HECT domain

GOSlim

14 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
transcription coactivator activity Blast molecular function
ubiquitin-protein transferase activity Orthology molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
ligase activity Blast molecular function
cytoplasmic vesicle Blast cellular component
metal ion binding Blast molecular function
intracellular part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
protein ubiquitination Hs biological process
transferase activity Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
proteasome complex Hs cellular component 281 2.41e-81
transcription coactivator activity Hs molecular function 281 2.41e-81
ubiquitin-protein transferase activity Hs molecular function 733 0.0
protein binding Hs molecular function 281 2.41e-81
nucleus Hs cellular component 281 2.41e-81
cytoplasm Hs cellular component 733 0.0
cytosol Hs cellular component 733 0.0
transferase activity Hs molecular function 733 0.0
ligase activity Hs molecular function 281 2.41e-81
cytoplasmic vesicle Hs cellular component 252 2.97e-70
metal ion binding Hs molecular function 281 2.41e-81
ubiquitin protein ligase activity Hs molecular function 733 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ubiquitin-protein transferase activity CDD molecular function 1.56008E-114

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