Aniseed - Gene card

Gene Card

Best human hits

GLI1; GLI2; GLI3

Species

P.mammillata

Unique Gene ID

Phmamm.g00009647

Gene Model ID

Phmamm.CG.MTP2014.S516.g09647

Location

S516:71356..85803

Transcript Models and Sequences

Phmamm.CG.MTP2014.S516.g09647.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily

GOSlim

84 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
spermatogenesis	Orthology	biological process
axon guidance	Orthology	biological process
central nervous system development	Orthology	biological process
brain development	Orthology	biological process
heart development	Orthology	biological process
microtubule binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
zinc ion binding	Orthology	molecular function
cell proliferation	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
response to wounding	Orthology	biological process
regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
nuclear speck	Orthology	cellular component
cell differentiation	Orthology	biological process
wound healing	Orthology	biological process
regulation of cell proliferation	Orthology	biological process
regulation of apoptotic process	Orthology	biological process
cell projection	Orthology	cellular component
negative regulation of apoptotic process	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
anatomical structure formation involved in morphogenesis	Orthology	biological process
neuron development	Orthology	biological process
anatomical structure development	Orthology	biological process
head development	Orthology	biological process
negative regulation of canonical Wnt signaling pathway	Orthology	biological process
system development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
cell development	Orthology	biological process
generation of neurons	Orthology	biological process
cell division	Orthology	biological process
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell projection part	Orthology	cellular component
microtubule	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process
gene expression	Orthology	biological process
proteolysis	Orthology	biological process
nucleoplasm part	Orthology	cellular component
neuron differentiation	Orthology	biological process
nervous system development	Orthology	biological process
immune system process	Orthology	biological process
enzyme binding	Orthology	molecular function
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
response to stimulus	Orthology	biological process
DNA replication	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
developmental process	Orthology	biological process
neurogenesis	Orthology	biological process
cell-cell signaling	Orthology	biological process
blood vessel development	Orthology	biological process
cellular response to organic substance	Orthology	biological process
organelle part	Orthology	cellular component
cell cycle G1/S phase transition	Orthology	biological process

GO (Orthology)

132 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
skeletal system development	Hs	biological process
osteoblast differentiation	Hs	biological process
branching involved in ureteric bud morphogenesis	Hs	biological process
kidney development	Hs	biological process
morphogenesis of an epithelium	Hs	biological process
positive regulation of neuroblast proliferation	Hs	biological process
chondrocyte differentiation	Hs	biological process
osteoblast development	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cilium	Hs	cellular component
axoneme	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
smoothened signaling pathway	Hs	biological process
multicellular organism development	Hs	biological process
spermatogenesis	Hs	biological process
pattern specification process	Hs	biological process
axon guidance	Hs	biological process
central nervous system development	Hs	biological process
ventral midline development	Hs	biological process
brain development	Hs	biological process
hindgut morphogenesis	Hs	biological process
heart development	Hs	biological process
beta-catenin binding	Hs	molecular function
microtubule binding	Hs	molecular function
transcription factor binding	Hs	molecular function
zinc ion binding	Hs	molecular function
cell proliferation	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
regulation of smoothened signaling pathway	Hs	biological process
response to wounding	Hs	biological process
response to mechanical stimulus	Hs	biological process
epidermal cell differentiation	Hs	biological process
anterior/posterior pattern specification	Hs	biological process
dorsal/ventral pattern formation	Hs	biological process
proximal/distal pattern formation	Hs	biological process
regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
protein processing	Hs	biological process
mediator complex	Hs	cellular component
nuclear speck	Hs	cellular component
transcriptional repressor complex	Hs	cellular component
floor plate formation	Hs	biological process
spinal cord dorsal/ventral patterning	Hs	biological process
ventral spinal cord development	Hs	biological process
spinal cord motor neuron differentiation	Hs	biological process
telencephalon development	Hs	biological process
subpallium development	Hs	biological process
optic nerve morphogenesis	Hs	biological process
forebrain dorsal/ventral pattern formation	Hs	biological process
forebrain radial glial cell differentiation	Hs	biological process
neural tube development	Hs	biological process
pituitary gland development	Hs	biological process
cell differentiation	Hs	biological process
melanocyte differentiation	Hs	biological process
lung development	Hs	biological process
embryonic limb morphogenesis	Hs	biological process
forebrain development	Hs	biological process
hindbrain development	Hs	biological process
motile cilium	Hs	cellular component
positive regulation of chondrocyte differentiation	Hs	biological process
T cell differentiation in thymus	Hs	biological process
histone acetyltransferase binding	Hs	molecular function
limb morphogenesis	Hs	biological process
tube development	Hs	biological process
wound healing	Hs	biological process
regulation of cell proliferation	Hs	biological process
positive regulation of protein import into nucleus	Hs	biological process
histone deacetylase binding	Hs	molecular function
regulation of apoptotic process	Hs	biological process
cell projection	Hs	cellular component
camera-type eye development	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
response to estrogen	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
regulation of cell differentiation	Hs	biological process
negative regulation of cell differentiation	Hs	biological process
negative regulation of neuron differentiation	Hs	biological process
positive regulation of neuron differentiation	Hs	biological process
regulation of osteoblast differentiation	Hs	biological process
positive regulation of osteoblast differentiation	Hs	biological process
positive regulation of DNA replication	Hs	biological process
negative regulation of smoothened signaling pathway	Hs	biological process
positive regulation of smoothened signaling pathway	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
digestive tract morphogenesis	Hs	biological process
embryonic digestive tract morphogenesis	Hs	biological process
embryonic digestive tract development	Hs	biological process
embryonic organ development	Hs	biological process
developmental growth	Hs	biological process
camera-type eye morphogenesis	Hs	biological process
embryonic morphogenesis	Hs	biological process
anatomical structure formation involved in morphogenesis	Hs	biological process
neuron fate commitment	Hs	biological process
neuron development	Hs	biological process
oligodendrocyte differentiation	Hs	biological process
branching morphogenesis of an epithelial tube	Hs	biological process
inner ear development	Hs	biological process
anatomical structure development	Hs	biological process
palate development	Hs	biological process
canonical Wnt signaling pathway	Hs	biological process
limb development	Hs	biological process
head development	Hs	biological process
artery development	Hs	biological process
lateral semicircular canal development	Hs	biological process
cellular response to organic cyclic compound	Hs	biological process
negative regulation of canonical Wnt signaling pathway	Hs	biological process
ciliary tip	Hs	cellular component
ciliary base	Hs	cellular component
positive regulation of cell cycle G1/S phase transition	Hs	biological process
promoter-specific chromatin binding	Hs	molecular function

GO (Blast)

35 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	124	1.99e-28
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	137	2.48e-32
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	137	2.48e-32
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	137	2.48e-32
nucleic acid binding	Hs	molecular function	137	2.48e-32
DNA binding	Hs	molecular function	137	2.48e-32
chromatin binding	Hs	molecular function	137	2.48e-32
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	137	2.48e-32
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	92.8	7.90e-19
protein binding	Hs	molecular function	137	2.48e-32
nucleus	Hs	cellular component	137	2.48e-32
nucleoplasm	Hs	cellular component	137	2.48e-32
nucleolus	Hs	cellular component	137	2.48e-32
cytoplasm	Hs	cellular component	137	2.48e-32
cytosol	Hs	cellular component	137	2.48e-32
cilium	Hs	cellular component	137	2.48e-32
axoneme	Hs	cellular component	137	2.48e-32
beta-catenin binding	Hs	molecular function	124	1.99e-28
microtubule binding	Hs	molecular function	92.8	7.90e-19
transcription factor binding	Hs	molecular function	137	2.48e-32
zinc ion binding	Hs	molecular function	137	2.48e-32
membrane	Hs	cellular component	137	2.48e-32
mediator complex	Hs	cellular component	124	1.99e-28
nuclear speck	Hs	cellular component	137	2.48e-32
transcriptional repressor complex	Hs	cellular component	124	1.99e-28
motile cilium	Hs	cellular component	137	2.48e-32
histone acetyltransferase binding	Hs	molecular function	124	1.99e-28
histone deacetylase binding	Hs	molecular function	124	1.99e-28
cell projection	Hs	cellular component	137	2.48e-32
sequence-specific DNA binding	Hs	molecular function	137	2.48e-32
transcription regulatory region DNA binding	Hs	molecular function	137	2.48e-32
metal ion binding	Hs	molecular function	137	2.48e-32
ciliary tip	Hs	cellular component	137	2.48e-32
ciliary base	Hs	cellular component	137	2.48e-32
promoter-specific chromatin binding	Hs	molecular function	137	2.48e-32

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	4.3E-4