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GENE CARD

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Gene Card

Best human hits

ASH1L; PHF20; PHF20L1

Species

P.mammillata

Unique Gene ID

Phmamm.g00009744

Gene Model ID

Phmamm.CG.MTP2014.S523.g09744

Location

S523:82668..106076

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S523.g09744.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA25YB19

Plate: Plate_25_B19

AHC0AAA31YC18

Plate: Plate_31_C18

AHC0AAA37YB14

Plate: Plate_37_B14

AHC0AAA57YC02

Plate: Plate_57_C02

AHC0AAA68YK17

Plate: Plate_68_K17

AHC0AAA123YM13

Plate: Plate_123_M13

AHC0AAA123YO07

Plate: Plate_123_O07

AHC0AAA150YO03

Plate: Plate_150_O03

AHC0AAA150YP22

Plate: Plate_150_P22

AHC0AAA85YM12

Plate: Plate_85_M12

AHC0AAA195YF19

Plate: Plate_195_F19

AHC0AAA207YI16

Plate: Plate_207_I16

AHC0AAA213YN07

Plate: Plate_213_N07

AHC0AAA222YI10

Plate: Plate_222_I10

AHC0AAA224YA11

Plate: Plate_224_A11

AHC0AAA228YK15

Plate: Plate_228_K15

AHC0AAA255YA22

Plate: Plate_255_A22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Chromo-like_dom_sf SUPERFAMILY Chromo-like domain superfamily
Mbt SMART Mbt repeat
Znf_PHD-finger Pfam Zinc finger, PHD-finger
PHF20 PANTHER PHD finger protein 20
Tudor SMART Tudor domain
Zinc_finger_PHD-type_CS ProSitePatterns Zinc finger, PHD-type, conserved site
Znf_PHD SMART Zinc finger, PHD-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type

GOSlim

21 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
transferase activity Blast molecular function
cell junction Blast cellular component
nuclear membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
nucleoplasm part Blast cellular component
macromolecular complex Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
metabolic process Blast biological process
organelle organization Blast biological process
cellular protein modification process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone acetyltransferase complex Hs cellular component 109 8.32e-24
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 109 8.32e-24
nucleic acid binding Hs molecular function 109 8.32e-24
DNA binding Hs molecular function 109 8.32e-24
chromatin binding Hs molecular function 59.3 2.49e-08
protein binding Hs molecular function 114 4.23e-25
nucleus Hs cellular component 114 4.23e-25
nucleoplasm Hs cellular component 109 8.32e-24
chromosome Hs cellular component 59.3 2.49e-08
Golgi apparatus Hs cellular component 59.3 2.49e-08
cytosol Hs cellular component 109 8.32e-24
bicellular tight junction Hs cellular component 59.3 2.49e-08
methyltransferase activity Hs molecular function 59.3 2.49e-08
transferase activity Hs molecular function 59.3 2.49e-08
histone-lysine N-methyltransferase activity Hs molecular function 59.3 2.49e-08
cell junction Hs cellular component 59.3 2.49e-08
nuclear membrane Hs cellular component 109 8.32e-24
histone methyltransferase activity (H3-K4 specific) Hs molecular function 59.3 2.49e-08
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 109 8.32e-24
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 109 8.32e-24
metal ion binding Hs molecular function 114 4.23e-25
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 109 8.32e-24
histone methyltransferase activity (H3-K36 specific) Hs molecular function 59.3 2.49e-08
extracellular exosome Hs cellular component 59.3 2.49e-08
MLL1 complex Hs cellular component 109 8.32e-24

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleus SMART cellular component 0.0023
regulation of transcription, DNA-templated SMART biological process 0.0023
MLL1 complex PANTHER cellular component 9.8E-84