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Gene Card

Best human hits

RARS; RARS2

Species

P.mammillata

Unique Gene ID

Phmamm.g00010104

Gene Model ID

Phmamm.CG.MTP2014.S564.g10104

Location

S564:38599..55032

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S564.g10104.01.t
Phmamm.CG.MTP2014.S564.g10104.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA4YA19

Plate: Plate_4_A19

AHC0AAA6YJ14

Plate: Plate_6_J14

AHC0AAA50YD23

Plate: Plate_50_D23

AHC0AAA60YL06

Plate: Plate_60_L06

AHC0AAA110YJ24

Plate: Plate_110_J24

AHC0AAA117YH24

Plate: Plate_117_H24

AHC0AAA131YF22

Plate: Plate_131_F22

AHC0AAA139YI19

Plate: Plate_139_I19

AHC0AAA142YB14

Plate: Plate_142_B14

AHC0AAA218YC09

Plate: Plate_218_C09

AHC0AAA224YK08

Plate: Plate_224_K08

AHC0AAA257YG06

Plate: Plate_257_G06

AHC0AAA258YA11

Plate: Plate_258_A11

AHC0AAA264YH15

Plate: Plate_264_H15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Arg-tRNA-synth_N Pfam Arginyl tRNA synthetase N-terminal domain
Arg-tRNA-ligase PANTHER Arginine-tRNA ligase
aa-tRNA-synth_I_CS ProSitePatterns Aminoacyl-tRNA synthetase, class I, conserved site
ArgRS_core CDD Arginyl-tRNA synthetase, catalytic core domain
Arg-tRNA-synth_N_sf SUPERFAMILY Arginyl tRNA synthetase N-terminal domain superfamily
ArgRS_core Pfam Arginyl-tRNA synthetase, catalytic core domain
Arg-tRNA-ligase TIGRFAM Arginine-tRNA ligase
Rossmann-like_a/b/a_fold Gene3D Rossmann-like alpha/beta/alpha sandwich fold
Arg-tRNA-ligase PRINTS Arginine-tRNA ligase
Arg-tRNA-ligase Hamap Arginine-tRNA ligase
Arg-tRNA-synth_N_sf Gene3D Arginyl tRNA synthetase N-terminal domain superfamily
DALR_anticod-bd Pfam DALR anticodon binding
tRNAsynth_Ia_anticodon-bd SUPERFAMILY Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
Arg-tRNA-synth_N SMART Arginyl tRNA synthetase N-terminal domain
DALR_anticod-bd SMART DALR anticodon binding

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Blast cellular component
cytosol Orthology cellular component
membrane Orthology cellular component
ligase activity Orthology molecular function
extracellular exosome Orthology cellular component
RNA metabolic process Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
cation binding Orthology molecular function
small molecule binding Orthology molecular function
anion binding Orthology molecular function
cell adhesion molecule binding Orthology molecular function

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
tRNA binding Hs molecular function
nucleotide binding Hs molecular function
aminoacyl-tRNA ligase activity Hs molecular function
arginine-tRNA ligase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
translation Hs biological process
tRNA aminoacylation for protein translation Hs biological process
arginyl-tRNA aminoacylation Hs biological process
membrane Hs cellular component
ligase activity Hs molecular function
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component
arginine binding Hs molecular function
cadherin binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 781 0.0
nucleotide binding Hs molecular function 781 0.0
RNA binding Hs molecular function 239 2.97e-71
aminoacyl-tRNA ligase activity Hs molecular function 781 0.0
arginine-tRNA ligase activity Hs molecular function 781 0.0
protein binding Hs molecular function 781 0.0
ATP binding Hs molecular function 781 0.0
nucleus Hs cellular component 781 0.0
nucleoplasm Hs cellular component 781 0.0
cytoplasm Hs cellular component 781 0.0
mitochondrion Hs cellular component 781 0.0
mitochondrial matrix Hs cellular component 239 2.97e-71
cytosol Hs cellular component 781 0.0
membrane Hs cellular component 781 0.0
ligase activity Hs molecular function 781 0.0
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component 781 0.0
arginine binding Hs molecular function 781 0.0
cadherin binding Hs molecular function 781 0.0
extracellular exosome Hs cellular component 781 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
nucleotide binding SUPERFAMILY molecular function 1.57E-31
aminoacyl-tRNA ligase activity SUPERFAMILY molecular function 1.57E-31
arginine-tRNA ligase activity PANTHER molecular function 1.0E-244
ATP binding PANTHER molecular function 1.0E-244
cytoplasm Pfam cellular component 1.7E-5
tRNA aminoacylation for protein translation SUPERFAMILY biological process 1.57E-31
arginyl-tRNA aminoacylation PANTHER biological process 1.0E-244

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