Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Homeobox_dom	SMART	Homeobox domain
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
HTH_motif	PRINTS	Helix-turn-helix motif
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	Pfam	Homeobox domain
Homeobox_metazoa	PRINTS	Homeobox domain, metazoa

GOSlim

26 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
transcription corepressor activity	Orthology	molecular function
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cell proliferation	Orthology	biological process
regulation of gene expression	Orthology	biological process
cytokine-mediated signaling pathway	Orthology	biological process
transcription regulatory region DNA binding	Orthology	molecular function
negative regulation of nucleic acid-templated transcription	Orthology	biological process
developmental process	Orthology	biological process
RNA binding	Blast	molecular function

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
endodermal cell fate specification	Hs	biological process
transcription corepressor activity	Hs	molecular function
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cell proliferation	Hs	biological process
regulation of gene expression	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
stem cell population maintenance	Hs	biological process
somatic stem cell population maintenance	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
regulation of cell differentiation	Hs	biological process
negative regulation of nucleic acid-templated transcription	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	120	7.13e-31
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	120	7.13e-31
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	115	2.17e-28
DNA binding	Hs	molecular function	120	7.13e-31
chromatin binding	Hs	molecular function	120	7.13e-31
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	118	1.01e-29
single-stranded RNA binding	Hs	molecular function	115	2.17e-28
protein binding	Hs	molecular function	120	7.13e-31
nucleus	Hs	cellular component	120	7.13e-31
sequence-specific DNA binding	Hs	molecular function	120	7.13e-31

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SUPERFAMILY	molecular function	5.99E-23
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function

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