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Gene Card

Best human hits

ADAMTS10; ADAMTS18; ADAMTS6

Species

P.mammillata

Unique Gene ID

Phmamm.g00010268

Gene Model ID

Phmamm.CG.MTP2014.S581.g10268

Location

S581:48431..61306

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S581.g10268.01.t
Phmamm.CG.MTP2014.S581.g10268.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA14YB12

Plate: Plate_14_B12

AHC0AAA16YN07

Plate: Plate_16_N07

AHC0AAA61YL15

Plate: Plate_61_L15

AHC0AAA104YJ20

Plate: Plate_104_J20

AHC0AAA174YG16

Plate: Plate_174_G16

AHC0AAA200YE09

Plate: Plate_200_E09

AHC0AAA217YA02

Plate: Plate_217_A02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
Peptidase_M12B Pfam Peptidase M12B, ADAM/reprolysin
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
Peptidase_M12B ProSiteProfiles Peptidase M12B, ADAM/reprolysin
Peptidase_M12B_N Pfam Peptidase M12B, propeptide
MetalloPept_cat_dom_sf Gene3D Metallopeptidase, catalytic domain superfamily
PLAC ProSiteProfiles PLAC
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
ADAM_spacer1 Pfam ADAM-TS Spacer 1
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
PLAC Pfam PLAC

GOSlim

11 results

GO Term Annotation Origin Type
metalloendopeptidase activity Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
proteolysis Orthology biological process
heart development Orthology biological process
peptidase activity Orthology molecular function
metallopeptidase activity Orthology molecular function
hydrolase activity Orthology molecular function
metal ion binding Orthology molecular function
extracellular region part Orthology cellular component
blood vessel development Orthology biological process

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
microfibril Hs cellular component
metalloendopeptidase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
proteolysis Hs biological process
heart development Hs biological process
peptidase activity Hs molecular function
metallopeptidase activity Hs molecular function
hydrolase activity Hs molecular function
extracellular matrix Hs cellular component
aorta development Hs biological process
metal ion binding Hs molecular function
coronary vasculature development Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
microfibril Hs cellular component 1032 0.0
metalloendopeptidase activity Hs molecular function 1208 0.0
protein binding Hs molecular function 1032 0.0
extracellular region Hs cellular component 1208 0.0
proteinaceous extracellular matrix Hs cellular component 1208 0.0
peptidase activity Hs molecular function 1208 0.0
metallopeptidase activity Hs molecular function 1208 0.0
hydrolase activity Hs molecular function 1208 0.0
extracellular matrix Hs cellular component 1032 0.0
metal ion binding Hs molecular function 1208 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
metalloendopeptidase activity Pfam molecular function 2.4E-24
proteolysis Pfam biological process 2.4E-24
peptidase activity Pfam molecular function 5.7E-8
metallopeptidase activity Gene3D molecular function 8.2E-92

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