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GENE CARD

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Gene Card

Best human hits

RNF144A; RNF19A; RNF19B

Species

P.mammillata

Unique Gene ID

Phmamm.g00010304

Gene Model ID

Phmamm.CG.MTP2014.S585.g10304

Location

S585:18828..31819

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA33YE10

Plate: Plate_33_E10

AHC0AAA34YK24

Plate: Plate_34_K24

AHC0AAA38YE08

Plate: Plate_38_E08

AHC0AAA39YD01

Plate: Plate_39_D01

AHC0AAA52YE12

Plate: Plate_52_E12

AHC0AAA52YJ02

Plate: Plate_52_J02

AHC0AAA74YA03

Plate: Plate_74_A03

AHC0AAA76YF12

Plate: Plate_76_F12

AHC0AAA121YA07

Plate: Plate_121_A07

AHC0AAA163YF15

Plate: Plate_163_F15

AHC0AAA173YC11

Plate: Plate_173_C11

AHC0AAA197YD04

Plate: Plate_197_D04

AHC0AAA228YJ23

Plate: Plate_228_J23

AHC0AAA38YE06

Plate: Plate_38_E06

AHC0AAA39YF03

Plate: Plate_39_F03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
E3_UB_ligase_RBR PANTHER E3 ubiquitin ligase RBR family
Znf_RING ProSiteProfiles Zinc finger, RING-type
IBR_dom Pfam IBR domain
IBR_dom SMART IBR domain
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type

GOSlim

34 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
immune system process Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Blast cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Blast cellular component
transcription factor binding Orthology molecular function
membrane Orthology cellular component
integral component of membrane Orthology cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
cytoplasmic vesicle Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
microtubule-based process Orthology biological process
organelle organization Orthology biological process
immune response Orthology biological process
enzyme binding Orthology molecular function
proteolysis Orthology biological process
lysosome Orthology cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
endosome Blast cellular component
bounding membrane of organelle Blast cellular component
organelle membrane Blast cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ubiquitin ligase complex Hs cellular component
protein polyubiquitination Hs biological process
microtubule cytoskeleton organization Hs biological process
adaptive immune response Hs biological process
immune system process Hs biological process
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
transcription factor binding Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
protein ubiquitination Hs biological process
transferase activity Hs molecular function
ubiquitin conjugating enzyme binding Hs molecular function
positive regulation of proteasomal ubiquitin-dependent protein catabolic process Hs biological process
cytolytic granule Hs cellular component
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 553 0.0
ubiquitin-protein transferase activity Hs molecular function 553 0.0
protein binding Hs molecular function 503 3.71e-169
cytoplasm Hs cellular component 553 0.0
endoplasmic reticulum Hs cellular component 503 3.71e-169
endoplasmic reticulum membrane Hs cellular component 503 3.71e-169
Golgi apparatus Hs cellular component 85.9 2.91e-18
centrosome Hs cellular component 553 0.0
microtubule organizing center Hs cellular component 553 0.0
cytosol Hs cellular component 553 0.0
cytoskeleton Hs cellular component 553 0.0
plasma membrane Hs cellular component 85.9 2.91e-18
transcription factor binding Hs molecular function 553 0.0
endosome membrane Hs cellular component 85.9 2.91e-18
membrane Hs cellular component 553 0.0
integral component of membrane Hs cellular component 553 0.0
transferase activity Hs molecular function 553 0.0
cytoplasmic vesicle membrane Hs cellular component 85.9 2.91e-18
cytoplasmic vesicle Hs cellular component 85.9 2.91e-18
ubiquitin conjugating enzyme binding Hs molecular function 553 0.0
intracellular membrane-bounded organelle Hs cellular component 85.9 2.91e-18
cytolytic granule Hs cellular component 503 3.71e-169
metal ion binding Hs molecular function 553 0.0
ubiquitin protein ligase activity Hs molecular function 553 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity PANTHER molecular function 1.0E-153
protein ubiquitination PANTHER biological process 1.0E-153