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GENE CARD

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Gene Card

Best human hits

ADGRB2; HMCN1; THBS1

Species

P.mammillata

Unique Gene ID

Phmamm.g00010407

Gene Model ID

Phmamm.CG.MTP2014.S596.g10407

Location

S596:16757..31427

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA19YG18

Plate: Plate_19_G18

AHC0AAA20YP09

Plate: Plate_20_P09

AHC0AAA26YN20

Plate: Plate_26_N20

AHC0AAA3YG05

Plate: Plate_3_G05

AHC0AAA39YI20

Plate: Plate_39_I20

AHC0AAA42YJ16

Plate: Plate_42_J16

AHC0AAA54YN06

Plate: Plate_54_N06

AHC0AAA68YI24

Plate: Plate_68_I24

AHC0AAA79YP18

Plate: Plate_79_P18

AHC0AAA154YA06

Plate: Plate_154_A06

AHC0AAA89YD16

Plate: Plate_89_D16

AHC0AAA177YJ03

Plate: Plate_177_J03

AHC0AAA259YH02

Plate: Plate_259_H02

AHC0AAA39YI18

Plate: Plate_39_I18

AHC0AAA54YP08

Plate: Plate_54_P08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat

GOSlim

33 results

GO Term Annotation Origin Type
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
integrin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum lumen Blast cellular component
centrosome Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
identical protein binding Blast molecular function
extracellular exosome Blast cellular component
anion binding Blast molecular function
macromolecular complex Blast cellular component
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
carbohydrate derivative binding Blast molecular function
plasma membrane part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
macromolecular complex binding Blast molecular function
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component
plasma membrane region Blast cellular component
binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

41 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
phosphatidylserine binding Hs molecular function 92.8 5.85e-19
fibronectin binding Hs molecular function 92.8 5.85e-19
signal transducer activity Hs molecular function 96.3 5.81e-20
transmembrane signaling receptor activity Hs molecular function 96.3 5.81e-20
G-protein coupled receptor activity Hs molecular function 96.3 5.81e-20
integrin binding Hs molecular function 92.8 5.85e-19
calcium ion binding Hs molecular function 101 1.51e-21
protein binding Hs molecular function 96.3 5.81e-20
extracellular region Hs cellular component 101 1.51e-21
fibrinogen complex Hs cellular component 92.8 5.85e-19
proteinaceous extracellular matrix Hs cellular component 101 1.51e-21
basement membrane Hs cellular component 101 1.51e-21
extracellular space Hs cellular component 92.8 5.85e-19
cytoplasm Hs cellular component 101 1.51e-21
endoplasmic reticulum Hs cellular component 92.8 5.85e-19
endoplasmic reticulum lumen Hs cellular component 92.8 5.85e-19
centrosome Hs cellular component 96.3 5.81e-20
plasma membrane Hs cellular component 96.3 5.81e-20
cell cortex Hs cellular component 101 1.51e-21
heparin binding Hs molecular function 92.8 5.85e-19
external side of plasma membrane Hs cellular component 92.8 5.85e-19
cell surface Hs cellular component 92.8 5.85e-19
membrane Hs cellular component 96.3 5.81e-20
integral component of membrane Hs cellular component 96.3 5.81e-20
sarcoplasmic reticulum Hs cellular component 92.8 5.85e-19
fibroblast growth factor binding Hs molecular function 92.8 5.85e-19
cell junction Hs cellular component 101 1.51e-21
secretory granule Hs cellular component 92.8 5.85e-19
low-density lipoprotein particle binding Hs molecular function 92.8 5.85e-19
extracellular matrix Hs cellular component 101 1.51e-21
platelet alpha granule Hs cellular component 92.8 5.85e-19
platelet alpha granule lumen Hs cellular component 92.8 5.85e-19
cleavage furrow Hs cellular component 101 1.51e-21
identical protein binding Hs molecular function 92.8 5.85e-19
laminin binding Hs molecular function 92.8 5.85e-19
proteoglycan binding Hs molecular function 92.8 5.85e-19
transforming growth factor beta binding Hs molecular function 92.8 5.85e-19
extracellular matrix binding Hs molecular function 92.8 5.85e-19
fibrinogen binding Hs molecular function 92.8 5.85e-19
collagen V binding Hs molecular function 92.8 5.85e-19
extracellular exosome Hs cellular component 101 1.51e-21

GO (InterProScan)

No result

GO Term Analysis Type e-value