Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. Gene 'Boleac.CG.SB_v3.S128...' > 
  4. > 

Gene Card

Best human hits

GTPBP1; GTPBP2; HBS1L

Species

P.mammillata

Unique Gene ID

Phmamm.g00002160

Gene Model ID

Phmamm.CG.MTP2014.S60.g02160

Location

S60:44515..54260

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S60.g02160.01.t
Phmamm.CG.MTP2014.S60.g02160.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA41YN14

Plate: Plate_41_N14

AHC0AAA79YL03

Plate: Plate_79_L03

AHC0AAA121YO10

Plate: Plate_121_O10

AHC0AAA128YL15

Plate: Plate_128_L15

AHC0AAA215YL10

Plate: Plate_215_L10

AHC0AAA258YE24

Plate: Plate_258_E24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
TF_GTP-bd_dom Pfam Transcription factor, GTP-binding domain
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
EFTu-like_2 Pfam Translation elongation factor EFTu-like, domain 2
GTPBP1-like CDD GTP binding protein 1-like, GTP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Transl_elong_EF1A/Init_IF2_C SUPERFAMILY Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
TF_GTP-bd_dom ProSiteProfiles Transcription factor, GTP-binding domain

GOSlim

22 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Blast molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
extracellular region Orthology cellular component
intracellular Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
intracellular membrane-bounded organelle Orthology cellular component
extracellular exosome Blast cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
cytoplasmic part Blast cellular component
macromolecular complex Blast cellular component
regulation of gene expression Blast biological process

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
platelet degranulation Hs biological process
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
extracellular region Hs cellular component
platelet alpha granule lumen Hs cellular component
intracellular membrane-bounded organelle Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 684 0.0
cytoplasmic exosome (RNase complex) Hs cellular component 501 1.12e-170
RNA binding Hs molecular function 501 1.12e-170
translation elongation factor activity Hs molecular function 75.9 3.22e-14
GTPase activity Hs molecular function 684 0.0
protein binding Hs molecular function 684 0.0
GTP binding Hs molecular function 684 0.0
extracellular region Hs cellular component 684 0.0
intracellular Hs cellular component 75.9 3.22e-14
cytoplasm Hs cellular component 501 1.12e-170
cytosol Hs cellular component 501 1.12e-170
membrane Hs cellular component 501 1.12e-170
integral component of membrane Hs cellular component 75.9 3.22e-14
platelet alpha granule lumen Hs cellular component 684 0.0
intracellular membrane-bounded organelle Hs cellular component 684 0.0
extracellular exosome Hs cellular component 75.9 3.22e-14

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 1.1E-26
GTP binding Pfam molecular function 1.1E-26

Back to Top