Aniseed - Gene card

Gene Card

Best human hits

SPECC1; SPECC1L; SPECC1L-ADORA2A

Species

P.mammillata

Unique Gene ID

Phmamm.g00002163

Gene Model ID

Phmamm.CG.MTP2014.S60.g02163

Location

S60:87640..100981

Transcript Models and Sequences

Phmamm.CG.MTP2014.S60.g02163.01.t
Phmamm.CG.MTP2014.S60.g02163.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

38 results

AHC0AAA54YE17

Plate: Plate_54_E17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
CH-domain	Pfam	Calponin homology domain
CH_dom_sf	SUPERFAMILY	CH domain superfamily
CH_dom_sf	Gene3D	CH domain superfamily
CH-domain	ProSiteProfiles	Calponin homology domain
CH-domain	CDD	Calponin homology domain
CH-domain	SMART	Calponin homology domain

GOSlim

9 results

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
membrane	Blast	cellular component
cell junction	Blast	cellular component
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	453	4.52e-143
nucleus	Hs	cellular component	347	3.29e-104
cytoplasm	Hs	cellular component	453	4.52e-143
spindle	Hs	cellular component	453	4.52e-143
cytosol	Hs	cellular component	453	4.52e-143
cytoskeleton	Hs	cellular component	453	4.52e-143
gap junction	Hs	cellular component	453	4.52e-143
actin cytoskeleton	Hs	cellular component	453	4.52e-143
membrane	Hs	cellular component	347	3.29e-104
cell junction	Hs	cellular component	453	4.52e-143

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	CDD	molecular function	5.44023E-21