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GENE CARD

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Gene Card

Best human hits

GSPT1; GSPT2; HBS1L

Species

P.mammillata

Unique Gene ID

Phmamm.g00010462

Gene Model ID

Phmamm.CG.MTP2014.S601.g10462

Location

S601:50297..52985

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S601.g10462.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA16YI19

Plate: Plate_16_I19

AHC0AAA49YC20

Plate: Plate_49_C20

AHC0AAA115YO04

Plate: Plate_115_O04

AHC0AAA119YN18

Plate: Plate_119_N18

AHC0AAA124YG04

Plate: Plate_124_G04

AHC0AAA128YJ24

Plate: Plate_128_J24

AHC0AAA84YA07

Plate: Plate_84_A07

AHC0AAA94YC18

Plate: Plate_94_C18

AHC0AAA211YM24

Plate: Plate_211_M24

AHC0AAA225YD16

Plate: Plate_225_D16

AHC0AAA226YN01

Plate: Plate_226_N01

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
G_TR_CS ProSitePatterns Tr-type G domain, conserved site
TF_GTP-bd_dom Pfam Transcription factor, GTP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Transl_elong_EFTu/EF1A_C Pfam Translation elongation factor EFTu/EF1A, C-terminal
TF_GTP-bd_dom PRINTS Transcription factor, GTP-binding domain
TF_GTP-bd_dom ProSiteProfiles Transcription factor, GTP-binding domain
Transl_elong_EF1A/Init_IF2_C SUPERFAMILY Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily

GOSlim

18 results

GO Term Annotation Origin Type
G1/S transition of mitotic cell cycle Orthology biological process
nucleotide binding Orthology molecular function
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
RNA binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
intracellular Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cell cycle Orthology biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
extracellular exosome Blast cellular component
regulation of gene expression Orthology biological process
cellular protein modification process Orthology biological process
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
G1/S transition of mitotic cell cycle Hs biological process
nucleotide binding Hs molecular function
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translational termination Hs biological process
RNA binding Hs molecular function
translation release factor activity Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
intracellular Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
translation Hs biological process
translational termination Hs biological process
protein methylation Hs biological process
cell cycle Hs biological process
translation release factor complex Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 711 0.0
RNA binding Hs molecular function 711 0.0
translation elongation factor activity Hs molecular function 356 7.14e-115
translation release factor activity Hs molecular function 711 0.0
GTPase activity Hs molecular function 711 0.0
protein binding Hs molecular function 711 0.0
GTP binding Hs molecular function 711 0.0
intracellular Hs cellular component 704 0.0
cytoplasm Hs cellular component 711 0.0
cytosol Hs cellular component 711 0.0
membrane Hs cellular component 356 7.14e-115
integral component of membrane Hs cellular component 356 7.14e-115
translation release factor complex Hs cellular component 711 0.0
extracellular exosome Hs cellular component 356 7.14e-115

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 5.2E-46
GTP binding Pfam molecular function 5.2E-46